RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 TRIM33Q9UPN9 1127 aa13.9□□□□□ -0.18
CHGB-201ENST00000378961 TRPC6Q9Y210 931 aa13.9□□□□□ -0.18
CHGB-201ENST00000378961 STK38LQ9Y2H1 464 aa13.9□□□□□ -0.18
CHGB-201ENST00000378961 LAMB1P07942 1786 aa13.9□□□□□ -0.18
CHGB-201ENST00000378961 GRID2IPA4D2P6 1211 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 CCT8L1PA6NM43 557 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 BMP15O95972 392 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 MMP10P09238 476 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 SCG2P13521 617 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 SLC8A1P32418 973 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 DPP8Q6V1X1 898 aaPredicted RBP13.89□□□□□ -0.19
CHGB-201ENST00000378961 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 SPDYE1Q8NFV5 336 aaPredicted RBP13.89□□□□□ -0.19
CHGB-201ENST00000378961 CALR3Q96L12 384 aaKnown RBP13.89□□□□□ -0.19
CHGB-201ENST00000378961 TRIM51Q9BSJ1 452 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 COA1Q9GZY4 146 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 CPVLQ9H3G5 476 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 ATP8A1Q9Y2Q0 1164 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 A0A087X0T9 212 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 TTI1O43156 1089 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 FAM228BP0C875 321 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 DHX9Q08211 1270 aaKnown RBP13.89□□□□□ -0.19
CHGB-201ENST00000378961 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 ASTE1Q2TB18 679 aaPredicted RBP13.89□□□□□ -0.19
CHGB-201ENST00000378961 LRRC34Q8IZ02 419 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 ARFGAP2Q8N6H7 521 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 C15orf41Q9Y2V0 281 aa13.89□□□□□ -0.19
CHGB-201ENST00000378961 KIF4AO95239 1232 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 CHN1P15882 459 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 DOK7Q18PE1 504 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 PDXDC1Q6P996 788 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 RUBCNQ92622 972 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 FAM163AQ96GL9 167 aaPredicted RBP13.88□□□□□ -0.19
CHGB-201ENST00000378961 TRIM9Q9C026 710 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 ZCWPW1Q9H0M4 648 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 KBTBD4Q9NVX7 518 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 ROBO3Q96MS0 1386 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 FLT1P17948 1338 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 FOXO6A8MYZ6 492 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 MAP3K13O43283 966 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 SART1O43290 800 aaKnown RBP13.88□□□□□ -0.19
CHGB-201ENST00000378961 SLCO1A2P46721 670 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 CDK8P49336 464 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 POLR2FP61218 127 aaKnown RBP13.88□□□□□ -0.19
CHGB-201ENST00000378961 CDK17Q00537 523 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 KCNMA1Q12791 1236 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 PFKFB3Q16875 520 aaPredicted RBP13.88□□□□□ -0.19
CHGB-201ENST00000378961 C11orf91Q3C1V1 193 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 CCDC38Q502W7 563 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 LACTB2Q53H82 288 aaPredicted RBP13.88□□□□□ -0.19
CHGB-201ENST00000378961 ERICH1Q86X53 443 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 CCDC50Q8IVM0 306 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
CHGB-201ENST00000378961 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 ARMC2Q8NEN0 867 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 XPO6Q96QU8 1125 aaKnown RBP13.88□□□□□ -0.19
CHGB-201ENST00000378961 EYA3Q99504 573 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 ISCUQ9H1K1 167 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 MLXIPLQ9NP71 852 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 GGA2Q9UJY4 613 aa13.88□□□□□ -0.19
CHGB-201ENST00000378961 A0A1W2PQJ5 194 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 DNAJC8O75937 253 aaPredicted RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 RASA1P20936 1047 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 LONP1P36776 959 aaKnown RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 GNAQP50148 359 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 IFI35P80217 286 aaPredicted RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 IFFO1Q0D2I5 559 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 PICALMQ13492 652 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 RAPGEF1Q13905 1077 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 FAM133AQ8N9E0 248 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 CCDC197Q8NCU1 140 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 ANKS1AQ92625 1134 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 CHMP6Q96FZ7 201 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 DHTKD1Q96HY7 919 aaPredicted RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 TCP11L1Q9NUJ3 509 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 C5orf60A6NFR6 353 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 LCA5LO95447 670 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 MMEP08473 750 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 HNRNPH3P31942 346 aaKnown RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 RHBDL3P58872 404 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 IRX1P78414 480 aaPredicted RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 LRRC14Q15048 493 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 TRIM68Q6AZZ1 485 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 CAPRIN2Q6IMN6 1127 aaKnown RBP13.87□□□□□ -0.19
CHGB-201ENST00000378961 KSR1Q8IVT5 923 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 MGARPQ8TDB4 240 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 MASTLQ96GX5 879 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 SPAG5Q96R06 1193 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 CCDC113Q9H0I3 377 aa13.87□□□□□ -0.19
CHGB-201ENST00000378961 PJA2O43164 708 aa13.86□□□□□ -0.19
CHGB-201ENST00000378961 UBOX5O94941 541 aa13.86□□□□□ -0.19
CHGB-201ENST00000378961 VIMP08670 466 aaKnown RBP13.86□□□□□ -0.19
CHGB-201ENST00000378961 TNNC1P63316 161 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms