RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 LGALS16A8MUM7 142 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 RSPH10B2B2RC85 870 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 RSPH10BP0C881 870 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 MTIF2P46199 727 aaKnown RBP21.46■■□□□ 1.03
SSU72-204ENST00000378726 FOXR2Q6PJQ5 311 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 ARMC9Q7Z3E5 817 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 NELFCDQ8IXH7 590 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 MB21D1Q8N884 522 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 CHST13Q8NET6 341 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 MAF1Q9H063 256 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 BTBD7Q9P203 1132 aa21.46■■□□□ 1.03
SSU72-204ENST00000378726 EFCAB8A8MWE9 144 aa21.45■■□□□ 1.03
SSU72-204ENST00000378726 GNG11P61952 73 aa21.45■■□□□ 1.03
SSU72-204ENST00000378726 TMCO3Q6UWJ1 677 aa21.45■■□□□ 1.03
SSU72-204ENST00000378726 PNMA8AQ86V59 439 aaPredicted RBP21.45■■□□□ 1.03
SSU72-204ENST00000378726 SFR1Q86XK3 245 aa21.45■■□□□ 1.03
SSU72-204ENST00000378726 ZNF507Q8TCN5 953 aa21.45■■□□□ 1.03
SSU72-204ENST00000378726 CLEC11AQ9Y240 323 aa21.45■■□□□ 1.03
SSU72-204ENST00000378726 SFI1A8K8P3 1242 aa21.45■■□□□ 1.02
SSU72-204ENST00000378726 CASQ1P31415 396 aa21.45■■□□□ 1.02
SSU72-204ENST00000378726 IRX3P78415 501 aaPredicted RBP21.45■■□□□ 1.02
SSU72-204ENST00000378726 NLRX1Q86UT6 975 aa21.45■■□□□ 1.02
SSU72-204ENST00000378726 ZSWIM4Q9H7M6 989 aa21.45■■□□□ 1.02
SSU72-204ENST00000378726 ARGLU1Q9NWB6 273 aaPredicted RBP21.45■■□□□ 1.02
SSU72-204ENST00000378726 COL4A3BPQ9Y5P4 624 aa21.45■■□□□ 1.02
SSU72-204ENST00000378726 MAFGO15525 162 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 STX10O60499 249 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 TBCAO75347 108 aaKnown RBP21.44■■□□□ 1.02
SSU72-204ENST00000378726 SEC31AO94979 1220 aaKnown RBP21.44■■□□□ 1.02
SSU72-204ENST00000378726 CASP14P31944 242 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 DNM2P50570 870 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 PPIL2Q13356 520 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 ZCWPW2Q504Y3 356 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 ANKRD35Q8N283 1001 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 OPTNQ96CV9 577 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 NOC4LQ9BVI4 516 aaKnown RBP21.44■■□□□ 1.02
SSU72-204ENST00000378726 KCNH4Q9UQ05 1017 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 B4DLN1 442 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 FKBP3Q00688 224 aaKnown RBP21.44■■□□□ 1.02
SSU72-204ENST00000378726 GPRASP2Q96D09 838 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 BCAS3Q9H6U6 928 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 WDR90Q96KV7 1748 aa21.44■■□□□ 1.02
SSU72-204ENST00000378726 TRAF5O00463 557 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 GYPCP04921 128 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 CASP5P51878 434 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 LRRC55Q6ZSA7 311 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 RIOX2Q8IUF8 465 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 INPP4AQ96PE3 977 aaPredicted RBP21.43■■□□□ 1.02
SSU72-204ENST00000378726 DESI2Q9BSY9 194 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 ASCC2Q9H1I8 757 aaPredicted RBP21.43■■□□□ 1.02
SSU72-204ENST00000378726 KCTD10Q9H3F6 313 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 OTOFQ9HC10 1997 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 A0A1W2PQC6 194 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 NKRFO15226 690 aaKnown RBP eCLIP21.43■■□□□ 1.02
SSU72-204ENST00000378726 TPM1P09493 284 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 QARSP47897 775 aaKnown RBP21.43■■□□□ 1.02
SSU72-204ENST00000378726 TBC1D8BQ0IIM8 1120 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 PANX2Q96RD6 677 aa21.43■■□□□ 1.02
SSU72-204ENST00000378726 MRPL44Q9H9J2 332 aaKnown RBP21.43■■□□□ 1.02
SSU72-204ENST00000378726 RBBP6Q7Z6E9 1792 aaKnown RBP21.42■■□□□ 1.02
SSU72-204ENST00000378726 PAPPA2Q9BXP8 1791 aa21.42■■□□□ 1.02
SSU72-204ENST00000378726 ARHGEF35A5YM69 484 aa21.42■■□□□ 1.02
SSU72-204ENST00000378726 FAM13AO94988 1023 aa21.42■■□□□ 1.02
SSU72-204ENST00000378726 GAP43P17677 238 aa21.42■■□□□ 1.02
SSU72-204ENST00000378726 FXR1P51114 621 aaKnown RBP eCLIP21.42■■□□□ 1.02
SSU72-204ENST00000378726 SPATC1LQ9H0A9 340 aa21.42■■□□□ 1.02
SSU72-204ENST00000378726 FBXO40Q9UH90 709 aa21.42■■□□□ 1.02
SSU72-204ENST00000378726 AGTPBP1Q9UPW5 1226 aa21.42■■□□□ 1.02
SSU72-204ENST00000378726 GOLGA6L9A6NEM1 432 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 RGS20O76081 388 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 MIIPQ5JXC2 388 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 EPM2AIP1Q7L775 607 aaPredicted RBP21.41■■□□□ 1.02
SSU72-204ENST00000378726 MYCT1Q8N699 235 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 PAGR1Q9BTK6 254 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 KCND2Q9NZV8 630 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 PTPRFP10586 1907 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 ERICH4A6NGS2 130 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 MFAP3LO75121 409 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 PRPF6O94906 941 aaKnown RBP21.41■■□□□ 1.02
SSU72-204ENST00000378726 CCNE2O96020 404 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 MYBP10242 640 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 HERVK_113P62684 666 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 KRT76Q01546 638 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 MTF1Q14872 753 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 LDLRAD1Q5T700 205 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 NCAPG2Q86XI2 1143 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 CNGA4Q8IV77 575 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 TCEAL9Q9UHQ7 104 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 MRFAP1Q9Y605 127 aa21.41■■□□□ 1.02
SSU72-204ENST00000378726 WDR64B1ANS9 1081 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 POTEJP0CG39 1038 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 SFNP31947 248 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 JAK3P52333 1124 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 CNTN2Q02246 1040 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 TRIM14Q14142 442 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 FASTKD5Q7L8L6 764 aaKnown RBP21.4■■□□□ 1.02
SSU72-204ENST00000378726 IWS1Q96ST2 819 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 PARVGQ9HBI0 331 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 OLFML3Q9NRN5 406 aa21.4■■□□□ 1.02
SSU72-204ENST00000378726 RNF225M0QZC1 329 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms