RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 FAM86B1E9PN63 330 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 SLC16A3O15427 465 aaKnown RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 HEXIM1O94992 359 aaKnown RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 GLI1P08151 1106 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 FAM86B2P0C5J1 330 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 ACTN1P12814 892 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 PON1P27169 355 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 HOXD13P35453 343 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 PRKCIP41743 596 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 FKBP1AP62942 108 aaKnown RBP19.93■□□□□ 0.78
TDP2-202ENST00000378198 FAM198AQ9UFP1 575 aa19.93■□□□□ 0.78
TDP2-202ENST00000378198 MYBP10242 640 aa19.92■□□□□ 0.78
TDP2-202ENST00000378198 HMGB2P26583 209 aaKnown RBP19.92■□□□□ 0.78
TDP2-202ENST00000378198 SHROOM1Q2M3G4 852 aaPredicted RBP19.92■□□□□ 0.78
TDP2-202ENST00000378198 SYDE2Q5VT97 1194 aa19.92■□□□□ 0.78
TDP2-202ENST00000378198 ZNF571Q7Z3V5 609 aaPredicted RBP19.92■□□□□ 0.78
TDP2-202ENST00000378198 EPB41L5Q9HCM4 733 aa19.92■□□□□ 0.78
TDP2-202ENST00000378198 RSPH14Q9UHP6 348 aa19.92■□□□□ 0.78
TDP2-202ENST00000378198 COL11A2P13942 1736 aaPredicted RBP19.92■□□□□ 0.78
TDP2-202ENST00000378198 MSH4O15457 936 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 EYA4O95677 639 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 NR3C1P04150 777 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 CYP3A4P08684 503 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 CACNB3P54284 484 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 TNNC1P63316 161 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 SLC20A2Q08357 652 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 EPHA7Q15375 998 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 RPS6KA1Q15418 735 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 USH1GQ495M9 461 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.91■□□□□ 0.78
TDP2-202ENST00000378198 PBKQ96KB5 322 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 ZNF646O15015 1829 aaPredicted RBP19.91■□□□□ 0.78
TDP2-202ENST00000378198 TBCAO75347 108 aaKnown RBP19.91■□□□□ 0.78
TDP2-202ENST00000378198 GUCY2DQ02846 1103 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 ABCB5Q2M3G0 1257 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 MEX3CQ5U5Q3 659 aaKnown RBP19.91■□□□□ 0.78
TDP2-202ENST00000378198 SH3BP5LQ7L8J4 393 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 MREGQ8N565 214 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 USP38Q8NB14 1042 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 KRT12Q99456 494 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 RASSF4Q9H2L5 321 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 NAGPAQ9UK23 515 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 VAV3Q9UKW4 847 aa19.91■□□□□ 0.78
TDP2-202ENST00000378198 PACSIN2Q9UNF0 486 aaPredicted RBP19.91■□□□□ 0.78
TDP2-202ENST00000378198 A6NNZ2 444 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 AKAP3O75969 853 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 GAP43P17677 238 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 PDE6BP35913 854 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 CARSP49589 748 aaKnown RBP19.9■□□□□ 0.78
TDP2-202ENST00000378198 DNA2P51530 1060 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 RBM5P52756 815 aaKnown RBP eCLIP19.9■□□□□ 0.78
TDP2-202ENST00000378198 SNAP25P60880 206 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 IKQ13123 557 aaPredicted RBP19.9■□□□□ 0.78
TDP2-202ENST00000378198 TUBB8Q3ZCM7 444 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 DCAF17Q5H9S7 520 aaPredicted RBP19.9■□□□□ 0.78
TDP2-202ENST00000378198 KIAA0825Q8IV33 1275 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 NLGN1Q8N2Q7 840 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 CAPS2Q9BXY5 557 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 BHMT2Q9H2M3 363 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 DBNDD1Q9H9R9 158 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 NFU1Q9UMS0 254 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 RABGAP1Q9Y3P9 1069 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 ASTN1O14525 1302 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 GTPBP10A4D1E9 387 aaKnown RBP19.9■□□□□ 0.78
TDP2-202ENST00000378198 FLOT1O75955 427 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 NDUFB10O96000 172 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 BMP3P12645 472 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 IRAK1P51617 712 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 STRIP1Q5VSL9 837 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 BTNL9Q6UXG8 535 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 VPS36Q86VN1 386 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 WHAMMQ8TF30 809 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.9■□□□□ 0.78
TDP2-202ENST00000378198 ZIM3Q96PE6 472 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 EIF2AK1Q9BQI3 630 aaKnown RBP19.9■□□□□ 0.78
TDP2-202ENST00000378198 OLFML3Q9NRN5 406 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 TMEM59LQ9UK28 342 aa19.9■□□□□ 0.78
TDP2-202ENST00000378198 SLX4Q8IY92 1834 aa19.89■□□□□ 0.78
TDP2-202ENST00000378198 KIF4AO95239 1232 aa19.89■□□□□ 0.77
TDP2-202ENST00000378198 GCNT3O95395 438 aa19.89■□□□□ 0.77
TDP2-202ENST00000378198 ZNF76P36508 570 aa19.89■□□□□ 0.77
TDP2-202ENST00000378198 ALKBH5Q6P6C2 394 aaKnown RBP19.89■□□□□ 0.77
TDP2-202ENST00000378198 C10orf67Q8IYJ2 551 aa19.89■□□□□ 0.77
TDP2-202ENST00000378198 MASTLQ96GX5 879 aa19.89■□□□□ 0.77
TDP2-202ENST00000378198 PCDHAC2Q9Y5I4 1007 aa19.89■□□□□ 0.77
TDP2-202ENST00000378198 AFF2P51816 1311 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 RSPH10B2B2RC85 870 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 PIK3CDO00329 1044 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 RSPH10BP0C881 870 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 NOP2P46087 812 aaKnown RBP19.88■□□□□ 0.77
TDP2-202ENST00000378198 JAM2P57087 298 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 CYP4A11Q02928 519 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 CFAP58Q5T655 872 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 TCERG1LQ5VWI1 586 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 TEX2Q8IWB9 1127 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 IQCKQ8N0W5 287 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 EIF1ADQ8N9N8 165 aaKnown RBP19.88■□□□□ 0.77
TDP2-202ENST00000378198 RBM46Q8TBY0 533 aaKnown RBP19.88■□□□□ 0.77
TDP2-202ENST00000378198 IFT81Q8WYA0 676 aa19.88■□□□□ 0.77
TDP2-202ENST00000378198 SLC35C1Q96A29 364 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms