RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 P3H4Q92791 437 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 TBC1D31Q96DN5 1066 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 UIMC1Q96RL1 719 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 KCTD10Q9H3F6 313 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18■□□□□ 0.47
TRIM39-201ENST00000376656 STXBP5LQ9Y2K9 1186 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 PCDHA2Q9Y5H9 948 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 ABCA3Q99758 1704 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 ATAD5Q96QE3 1844 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 PPP1R12BO60237 982 aaPredicted RBP18■□□□□ 0.47
TRIM39-201ENST00000376656 SHBGP04278 402 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 SLC8A1P32418 973 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 PPP1R7Q15435 360 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 CCDC197Q8NCU1 140 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 RBM46Q8TBY0 533 aaKnown RBP18■□□□□ 0.47
TRIM39-201ENST00000376656 SCFD1Q8WVM8 642 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 NOD2Q9HC29 1040 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 SWAP70Q9UH65 585 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 BAIAP2L1Q9UHR4 511 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 CLNS1AP54105 237 aaKnown RBP18■□□□□ 0.47
TRIM39-201ENST00000376656 ACCSLQ4AC99 568 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 ATP8B4Q8TF62 1192 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 CNOT10Q9H9A5 744 aaKnown RBP18■□□□□ 0.47
TRIM39-201ENST00000376656 ATP6V0A4Q9HBG4 840 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 BTG4Q9NY30 223 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 UTP11Q9Y3A2 253 aaKnown RBP18■□□□□ 0.47
TRIM39-201ENST00000376656 E9PMD0 336 aa17.99■□□□□ 0.47
TRIM39-201ENST00000376656 UCHL3P15374 230 aa17.99■□□□□ 0.47
TRIM39-201ENST00000376656 CHN1P15882 459 aa17.99■□□□□ 0.47
TRIM39-201ENST00000376656 ZNF317Q96PQ6 595 aaPredicted RBP17.99■□□□□ 0.47
TRIM39-201ENST00000376656 FAM114A2Q9NRY5 505 aa17.99■□□□□ 0.47
TRIM39-201ENST00000376656 POU5F1Q01860 360 aaKnown RBP17.99■□□□□ 0.47
TRIM39-201ENST00000376656 DIXDC1Q155Q3 683 aa17.99■□□□□ 0.47
TRIM39-201ENST00000376656 SLFN11Q7Z7L1 901 aa17.99■□□□□ 0.47
TRIM39-201ENST00000376656 DAAM2Q86T65 1068 aa17.99■□□□□ 0.47
TRIM39-201ENST00000376656 HDAC9Q9UKV0 1011 aa17.99■□□□□ 0.47
TRIM39-201ENST00000376656 PPFIA2O75334 1257 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 HOXA7P31268 230 aaPredicted RBP17.98■□□□□ 0.47
TRIM39-201ENST00000376656 HERC4Q5GLZ8 1057 aaPredicted RBP17.98■□□□□ 0.47
TRIM39-201ENST00000376656 NT5DC3Q86UY8 548 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 MAPKAPK5Q8IW41 473 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 FMO2Q99518 471 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 SELENOSQ9BQE4 189 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 TXLNGYQ9BZA5 131 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 SUCLA2Q9P2R7 463 aaPredicted RBP17.98■□□□□ 0.47
TRIM39-201ENST00000376656 AJAP1Q9UKB5 411 aaPredicted RBP17.98■□□□□ 0.47
TRIM39-201ENST00000376656 MYH14Q7Z406 1995 aaKnown RBP17.98■□□□□ 0.47
TRIM39-201ENST00000376656 MAST2Q6P0Q8 1798 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 ESYT2A0FGR8 921 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 PAX7P23759 505 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 TNNI2P48788 182 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 ITPK1Q13572 414 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 TAX1BP1Q86VP1 789 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 EPB41L4BQ9H329 900 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 USP17L5A8MUK1 530 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 MMEP08473 750 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 COPB2P35606 906 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 CENPTQ96BT3 561 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 EMILIN3Q9NT22 766 aa17.98■□□□□ 0.47
TRIM39-201ENST00000376656 FRMPD2Q68DX3 1309 aaPredicted RBP17.97■□□□□ 0.47
TRIM39-201ENST00000376656 FGGP02679 453 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 SEPT2Q15019 361 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 ADAT2Q7Z6V5 191 aaKnown RBP17.97■□□□□ 0.47
TRIM39-201ENST00000376656 HAS1Q92839 578 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 EYA3Q99504 573 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 NR2F2P24468 414 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 ADCY7P51828 1080 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 CCDC65Q8IXS2 484 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 ATXN2LQ8WWM7 1075 aaKnown RBP17.97■□□□□ 0.47
TRIM39-201ENST00000376656 TCP11Q8WWU5 503 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 CUL5Q93034 780 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 MTFR1LQ9H019 292 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 ADAM7Q9H2U9 754 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 BMP2KQ9NSY1 1161 aaPredicted RBP17.97■□□□□ 0.47
TRIM39-201ENST00000376656 NENFQ9UMX5 172 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 BZW2Q9Y6E2 419 aaKnown RBP17.97■□□□□ 0.47
TRIM39-201ENST00000376656 SNED1Q8TER0 1413 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 FLOT1O75955 427 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 H2AFZP0C0S5 128 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 PON1P27169 355 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 EIF3BP55884 814 aaKnown RBP17.97■□□□□ 0.47
TRIM39-201ENST00000376656 CRYMQ14894 314 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 GRIK5Q16478 980 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 UBE2SQ16763 222 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 NBPF9Q3BBW0 867 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 H2AFVQ71UI9 128 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 TEX11Q8IYF3 940 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 LRRC34Q8IZ02 419 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 HES6Q96HZ4 224 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 FAXDC2Q96IV6 333 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 ZHX3Q9H4I2 956 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
TRIM39-201ENST00000376656 TLDC2A0PJX2 215 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 FAM170AA1A519 330 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 SMIM23A6NLE4 172 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 CETN3O15182 167 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
TRIM39-201ENST00000376656 NT5C2P49902 561 aa17.96■□□□□ 0.47
TRIM39-201ENST00000376656 ZC3H3Q8IXZ2 948 aaKnown RBP17.96■□□□□ 0.47
TRIM39-201ENST00000376656 CCDC63Q8NA47 563 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms