RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PABPC5Q96DU9 382 aaKnown RBP16.78■□□□□ 0.28
HDAC6-204ENST00000376643 TBC1D22BQ9NU19 505 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 BRPF3Q9ULD4 1205 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 TELO2Q9Y4R8 837 aa16.78■□□□□ 0.28
HDAC6-204ENST00000376643 IGSF9BQ9UPX0 1349 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 CYP3A4P08684 503 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 KRT76Q01546 638 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 ZNF484Q5JVG2 852 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 PLA2G4DQ86XP0 818 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 SMAP1Q8IYB5 467 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-204ENST00000376643 REXO1Q8N1G1 1221 aaKnown RBP16.77■□□□□ 0.28
HDAC6-204ENST00000376643 FBXL16Q8N461 479 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 ATP8B4Q8TF62 1192 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 TCEANC2Q96MN5 208 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 PCYT2Q99447 389 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 CELF4Q9BZC1 486 aaKnown RBP16.77■□□□□ 0.28
HDAC6-204ENST00000376643 CEP131Q9UPN4 1083 aa16.77■□□□□ 0.28
HDAC6-204ENST00000376643 RALGAPA2Q2PPJ7 1873 aa16.77■□□□□ 0.27
HDAC6-204ENST00000376643 IGKV6D-21A0A0A0MT36 114 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 IPO5O00410 1097 aaKnown RBP16.76■□□□□ 0.27
HDAC6-204ENST00000376643 DGKIO75912 1065 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 ARP10275 920 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 PTCRAQ6ISU1 281 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-204ENST00000376643 TYW1BQ6NUM6 668 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 ZNF746Q6NUN9 644 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-204ENST00000376643 MTHFD1LQ6UB35 978 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 RASEFQ8IZ41 740 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 CYP2W1Q8TAV3 490 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 P2RX5Q93086 422 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 ZMYND12Q9H0C1 365 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 RC3H2Q9HBD1 1191 aaKnown RBP16.76■□□□□ 0.27
HDAC6-204ENST00000376643 ZNF302Q9NR11 478 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 LRFN2Q9ULH4 789 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 HCN4Q9Y3Q4 1203 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 NID2Q14112 1375 aa16.76■□□□□ 0.27
HDAC6-204ENST00000376643 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
HDAC6-204ENST00000376643 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 EPB41L2O43491 1005 aaKnown RBP16.75■□□□□ 0.27
HDAC6-204ENST00000376643 CD52P31358 61 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 ITGB3BPQ13352 177 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-204ENST00000376643 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-204ENST00000376643 TCEAL5Q5H9L2 206 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 TMEM31Q5JXX7 168 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 ABHD15Q6UXT9 468 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 CKAP2LQ8IYA6 745 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 NEK9Q8TD19 979 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 BBXQ8WY36 941 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-204ENST00000376643 KCNB2Q92953 911 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 ZNF689Q96CS4 500 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-204ENST00000376643 PGBD1Q96JS3 809 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 FAM167AQ96KS9 214 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 JAKMIP1Q96N16 626 aaKnown RBP16.75■□□□□ 0.27
HDAC6-204ENST00000376643 ZNF577Q9BSK1 485 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 C1orf112Q9NSG2 853 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 ARIH1Q9Y4X5 557 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-204ENST00000376643 BDP1A6H8Y1 2624 aa16.75■□□□□ 0.27
HDAC6-204ENST00000376643 GPR182O15218 404 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 PRPF3O43395 683 aaKnown RBP16.74■□□□□ 0.27
HDAC6-204ENST00000376643 MMP1P03956 469 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 PSAPP07602 524 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 ALADP13716 330 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 KLRC1P26715 233 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 CDC27P30260 824 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 HSPA4P34932 840 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 COL19A1Q14993 1142 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 JAKMIP3Q5VZ66 844 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 EP400NLQ6ZTU2 488 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 Q6ZUG5 572 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 GJD3Q8N144 294 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 BRF1Q92994 677 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 RNF26Q9BY78 433 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-204ENST00000376643 OSBPL7Q9BZF2 842 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 AGO3Q9H9G7 860 aaKnown RBP16.74■□□□□ 0.27
HDAC6-204ENST00000376643 AAASQ9NRG9 546 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 FAM217BQ9NTX9 383 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-204ENST00000376643 TMEM260Q9NX78 707 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 PADI3Q9ULW8 664 aa16.74■□□□□ 0.27
HDAC6-204ENST00000376643 GRXCR2A6NFK2 248 aa16.73■□□□□ 0.27
HDAC6-204ENST00000376643 DDX39AO00148 427 aaKnown RBP16.73■□□□□ 0.27
HDAC6-204ENST00000376643 MAGEB2O15479 319 aa16.73■□□□□ 0.27
HDAC6-204ENST00000376643 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-204ENST00000376643 ADD1P35611 737 aaKnown RBP16.73■□□□□ 0.27
HDAC6-204ENST00000376643 CSPP1Q1MSJ5 1256 aa16.73■□□□□ 0.27
HDAC6-204ENST00000376643 FAM178BQ8IXR5 827 aa16.73■□□□□ 0.27
HDAC6-204ENST00000376643 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
HDAC6-204ENST00000376643 FAM177A1Q8N128 213 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-204ENST00000376643 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-204ENST00000376643 POP1Q99575 1024 aaKnown RBP16.73■□□□□ 0.27
HDAC6-204ENST00000376643 PCDHA10Q9Y5I2 948 aa16.73■□□□□ 0.27
HDAC6-204ENST00000376643 XIRP2A4UGR9 3374 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 TTC3P53804 2025 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 BRWD1Q9NSI6 2320 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 DENND3A2RUS2 1198 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 FAM86B1E9PN63 330 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 RPS6KA5O75582 802 aa16.72■□□□□ 0.27
HDAC6-204ENST00000376643 FAM86B2P0C5J1 330 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms