RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 H3BQ06 376 aaPredicted RBP21.04■□□□□ 0.96
HDAC6-202ENST00000376610 STAG3L1P0CL83 205 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 METAP2P50579 478 aaKnown RBP eCLIP21.04■□□□□ 0.96
HDAC6-202ENST00000376610 ITGB3BPQ13352 177 aaPredicted RBP21.04■□□□□ 0.96
HDAC6-202ENST00000376610 ADCK5Q3MIX3 580 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 NIPA1Q7RTP0 329 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 RASEFQ8IZ41 740 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 NEK9Q8TD19 979 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 CCDC12Q8WUD4 166 aaPredicted RBP21.04■□□□□ 0.96
HDAC6-202ENST00000376610 TRAPPC12Q8WVT3 735 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 CLP1Q92989 425 aaKnown RBP21.04■□□□□ 0.96
HDAC6-202ENST00000376610 ZBTB10Q96DT7 871 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 PLVAPQ9BX97 442 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 AGO3Q9H9G7 860 aaKnown RBP21.04■□□□□ 0.96
HDAC6-202ENST00000376610 RC3H2Q9HBD1 1191 aaKnown RBP21.04■□□□□ 0.96
HDAC6-202ENST00000376610 TCEAL9Q9UHQ7 104 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 HCN4Q9Y3Q4 1203 aa21.04■□□□□ 0.96
HDAC6-202ENST00000376610 GRXCR2A6NFK2 248 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 DDX39AO00148 427 aaKnown RBP21.03■□□□□ 0.96
HDAC6-202ENST00000376610 DGKIO75912 1065 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 IL9P15248 144 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 MCTP2Q6DN12 878 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 PLA2G4DQ86XP0 818 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 NPAS4Q8IUM7 802 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 ZNF689Q96CS4 500 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-202ENST00000376610 LRFN3Q9BTN0 628 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 CELF4Q9BZC1 486 aaKnown RBP21.03■□□□□ 0.96
HDAC6-202ENST00000376610 TMEM260Q9NX78 707 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 CLDND1Q9NY35 253 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 PADI3Q9ULW8 664 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 IGSF9BQ9UPX0 1349 aa21.03■□□□□ 0.96
HDAC6-202ENST00000376610 HBP1O60381 514 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 ATG7O95352 703 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 CDC27P30260 824 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 CLK2P49760 499 aaKnown RBP21.02■□□□□ 0.96
HDAC6-202ENST00000376610 KRT76Q01546 638 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 PFKFB3Q16875 520 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-202ENST00000376610 JAKMIP3Q5VZ66 844 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 MIS18BP1Q6P0N0 1132 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 MTHFD1LQ6UB35 978 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 FAM43BQ6ZT52 329 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-202ENST00000376610 PPP2R3CQ969Q6 453 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 FAM122AQ96E09 287 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 C6orf50Q9HD87 102 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 ZNF302Q9NR11 478 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 RNF216Q9NWF9 866 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-202ENST00000376610 LRFN2Q9ULH4 789 aa21.02■□□□□ 0.96
HDAC6-202ENST00000376610 COL1A2P08123 1366 aa21.01■□□□□ 0.95
HDAC6-202ENST00000376610 GRM6O15303 877 aa21.01■□□□□ 0.95
HDAC6-202ENST00000376610 SCG2P13521 617 aa21.01■□□□□ 0.95
HDAC6-202ENST00000376610 AKAP17AQ02040 695 aaKnown RBP21.01■□□□□ 0.95
HDAC6-202ENST00000376610 ODR4Q5SWX8 454 aa21.01■□□□□ 0.95
HDAC6-202ENST00000376610 CMTR2Q8IYT2 770 aaKnown RBP21.01■□□□□ 0.95
HDAC6-202ENST00000376610 ATP8B4Q8TF62 1192 aa21.01■□□□□ 0.95
HDAC6-202ENST00000376610 GINS2Q9Y248 185 aa21.01■□□□□ 0.95
HDAC6-202ENST00000376610 KDM3AQ9Y4C1 1321 aa21.01■□□□□ 0.95
HDAC6-202ENST00000376610 MYH9P35579 1960 aaKnown RBP21■□□□□ 0.95
HDAC6-202ENST00000376610 IGKV6D-21A0A0A0MT36 114 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 PI4K2BG5E9Z4 385 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 IPO5O00410 1097 aaKnown RBP21■□□□□ 0.95
HDAC6-202ENST00000376610 GPR37L1O60883 481 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 KLRC1P26715 233 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 GNA11P29992 359 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 ADD1P35611 737 aaKnown RBP21■□□□□ 0.95
HDAC6-202ENST00000376610 SETQ01105 290 aaPredicted RBP21■□□□□ 0.95
HDAC6-202ENST00000376610 NAALADL2Q58DX5 795 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 ZNF484Q5JVG2 852 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 PDXDC2PQ6P474 469 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 ABHD15Q6UXT9 468 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 SKAP1Q86WV1 359 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 CKAP2LQ8IYA6 745 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 REXO1Q8N1G1 1221 aaKnown RBP21■□□□□ 0.95
HDAC6-202ENST00000376610 LINC01599Q8WXQ3 324 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 CD320Q9NPF0 282 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 FAM217BQ9NTX9 383 aaPredicted RBP21■□□□□ 0.95
HDAC6-202ENST00000376610 TBC1D22BQ9NU19 505 aa21■□□□□ 0.95
HDAC6-202ENST00000376610 ESYT2A0FGR8 921 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 FAM86B1E9PN63 330 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 CCNE2O96020 404 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 MMP1P03956 469 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 CYP3A4P08684 503 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 FAM86B2P0C5J1 330 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 ALADP13716 330 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 PLA2G5P39877 138 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 APOBRQ0VD83 1088 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 NFX1Q12986 1120 aaKnown RBP20.99■□□□□ 0.95
HDAC6-202ENST00000376610 COL19A1Q14993 1142 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 Q6ZUG5 572 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 CCDC60Q8IWA6 550 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-202ENST00000376610 P2RX5Q93086 422 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 JAKMIP1Q96N16 626 aaKnown RBP20.99■□□□□ 0.95
HDAC6-202ENST00000376610 ZNF577Q9BSK1 485 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 MRPL42Q9Y6G3 142 aaKnown RBP20.99■□□□□ 0.95
HDAC6-202ENST00000376610 EVPLQ92817 2033 aa20.99■□□□□ 0.95
HDAC6-202ENST00000376610 RPS6KA5O75582 802 aa20.98■□□□□ 0.95
HDAC6-202ENST00000376610 CSPG5O95196 566 aa20.98■□□□□ 0.95
HDAC6-202ENST00000376610 LINC00271P0C7V0 271 aa20.98■□□□□ 0.95
HDAC6-202ENST00000376610 IBSPP21815 317 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-202ENST00000376610 PAN2Q504Q3 1202 aaKnown RBP20.98■□□□□ 0.95
HDAC6-202ENST00000376610 SWSAP1Q6NVH7 229 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms