RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 SQORQ9Y6N5 450 aa17.06■□□□□ 0.32
CLCN6-204ENST00000376491 IGKV6D-21A0A0A0MT36 114 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 SMCO2A6NFE2 343 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 ADAMTS3O15072 1205 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 ZBTB43O43298 467 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 CCNE2O96020 404 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 FOSP01100 380 aaPredicted RBP17.05■□□□□ 0.32
CLCN6-204ENST00000376491 SREBF1P36956 1147 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 CAMK1Q14012 370 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 CTC1Q2NKJ3 1217 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 PUS10Q3MIT2 529 aaKnown RBP17.05■□□□□ 0.32
CLCN6-204ENST00000376491 CELF4Q9BZC1 486 aaKnown RBP17.05■□□□□ 0.32
CLCN6-204ENST00000376491 CLDND1Q9NY35 253 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 BARHL2Q9NY43 387 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 PADI3Q9ULW8 664 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 RWDD3Q9Y3V2 267 aa17.05■□□□□ 0.32
CLCN6-204ENST00000376491 MYH9P35579 1960 aaKnown RBP17.05■□□□□ 0.32
CLCN6-204ENST00000376491 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
CLCN6-204ENST00000376491 IGSF9BQ9UPX0 1349 aa17.04■□□□□ 0.32
CLCN6-204ENST00000376491 DDX39AO00148 427 aaKnown RBP17.04■□□□□ 0.32
CLCN6-204ENST00000376491 RPLP2P05387 115 aaKnown RBP17.04■□□□□ 0.32
CLCN6-204ENST00000376491 SSTR3P32745 418 aaPredicted RBP17.04■□□□□ 0.32
CLCN6-204ENST00000376491 DLX2Q07687 328 aaPredicted RBP17.04■□□□□ 0.32
CLCN6-204ENST00000376491 HYAL1Q12794 435 aa17.04■□□□□ 0.32
CLCN6-204ENST00000376491 AP3B2Q13367 1082 aa17.04■□□□□ 0.32
CLCN6-204ENST00000376491 MTHFD1LQ6UB35 978 aa17.04■□□□□ 0.32
CLCN6-204ENST00000376491 TEX2Q8IWB9 1127 aa17.04■□□□□ 0.32
CLCN6-204ENST00000376491 FAM122AQ96E09 287 aa17.04■□□□□ 0.32
CLCN6-204ENST00000376491 TMX1Q9H3N1 280 aa17.04■□□□□ 0.32
CLCN6-204ENST00000376491 MRPL42Q9Y6G3 142 aaKnown RBP17.04■□□□□ 0.32
CLCN6-204ENST00000376491 KDM3AQ9Y4C1 1321 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 KLF18A0A0U1RQI7 1052 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 SMIM35A0A1B0GVV1 85 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 GOLGA8AA7E2F4 631 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 GOLGA8BA8MQT2 603 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 FAM86B1E9PN63 330 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 hCG_1984214I3L0E3 225 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 M0QZ92 97 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 CSPG5O95196 566 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 MMP1P03956 469 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 FAM86B2P0C5J1 330 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 GTF2F1P35269 517 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLCN6-204ENST00000376491 ABHD15Q6UXT9 468 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 NPAS4Q8IUM7 802 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 ZNF713Q8N859 430 aaPredicted RBP17.03■□□□□ 0.32
CLCN6-204ENST00000376491 CRYGNQ8WXF5 182 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 TNPO1Q92973 898 aaKnown RBP17.03■□□□□ 0.32
CLCN6-204ENST00000376491 PLVAPQ9BX97 442 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 FTHL17Q9BXU8 183 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 ALG13Q9NP73 1137 aaKnown RBP17.03■□□□□ 0.32
CLCN6-204ENST00000376491 PLAGL2Q9UPG8 496 aa17.03■□□□□ 0.32
CLCN6-204ENST00000376491 FNDC1Q4ZHG4 1894 aaPredicted RBP17.03■□□□□ 0.32
CLCN6-204ENST00000376491 PLXNA4Q9HCM2 1894 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 DHX15O43143 795 aaKnown RBP17.02■□□□□ 0.32
CLCN6-204ENST00000376491 DNAJB1P25685 340 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 KLRC1P26715 233 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 GATMP50440 423 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 KRT76Q01546 638 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 ZP2Q05996 745 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 PAK2Q13177 524 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 TMEM266Q2M3C6 531 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 JAKMIP3Q5VZ66 844 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 NIPA1Q7RTP0 329 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 PLA2G4DQ86XP0 818 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 CCDC60Q8IWA6 550 aaPredicted RBP17.02■□□□□ 0.32
CLCN6-204ENST00000376491 CMTR2Q8IYT2 770 aaKnown RBP17.02■□□□□ 0.32
CLCN6-204ENST00000376491 NME8Q8N427 588 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 UIMC1Q96RL1 719 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 CDHR5Q9HBB8 845 aa17.02■□□□□ 0.32
CLCN6-204ENST00000376491 IGLV3-22A0A075B6J6 115 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 C19orf67A6NJJ6 358 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 NCK2O43639 380 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 HBP1O60381 514 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 TBX10O75333 385 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 ITGB1P05556 798 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 SCG2P13521 617 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 CPA1P15085 419 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 ATP4AP20648 1035 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
CLCN6-204ENST00000376491 ZNF76P36508 570 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 SLC26A2P50443 739 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 PFKFB3Q16875 520 aaPredicted RBP17.01■□□□□ 0.31
CLCN6-204ENST00000376491 PAN2Q504Q3 1202 aaKnown RBP17.01■□□□□ 0.31
CLCN6-204ENST00000376491 SPPL3Q8TCT6 385 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 ATP8B4Q8TF62 1192 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 TMEM40Q8WWA1 233 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 P2RX5Q93086 422 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 HCN4Q9Y3Q4 1203 aa17.01■□□□□ 0.31
CLCN6-204ENST00000376491 ARIH1Q9Y4X5 557 aaPredicted RBP17.01■□□□□ 0.31
CLCN6-204ENST00000376491 ZBTB42B2RXF5 422 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 BACH1O14867 736 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 LINC01565O15544 149 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 MBTPS2O43462 519 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 MGEA5O60502 916 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 CYP3A4P08684 503 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 STAG3L1P0CL83 205 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 IRS1P35568 1242 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 RCAN1P53805 252 aa17■□□□□ 0.31
CLCN6-204ENST00000376491 NFX1Q12986 1120 aaKnown RBP17■□□□□ 0.31
CLCN6-204ENST00000376491 CLUL1Q15846 466 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms