RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
LSM2-208ENST00000375661 SQORQ9Y6N5 450 aa13.9□□□□□ -0.18
LSM2-208ENST00000375661 ENPP3O14638 875 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 DGKIO75912 1065 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 LARGE1O95461 756 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 GHRP10912 638 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 FUT2Q10981 343 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 BTG3Q14201 252 aaPredicted RBP13.89□□□□□ -0.19
LSM2-208ENST00000375661 LPIN1Q14693 890 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 PKN1Q16512 942 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 ME3Q16798 604 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 TSHZ1Q6ZSZ6 1077 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 FAM43BQ6ZT52 329 aaPredicted RBP13.89□□□□□ -0.19
LSM2-208ENST00000375661 HFE2Q6ZVN8 426 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 BMP8AQ7Z5Y6 402 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 SMARCC2Q8TAQ2 1214 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 CDHR1Q96JP9 859 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 ERAP1Q9NZ08 941 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 RTEL1Q9NZ71 1219 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 CD207Q9UJ71 328 aa13.89□□□□□ -0.19
LSM2-208ENST00000375661 MBLAC1A4D2B0 266 aaPredicted RBP13.88□□□□□ -0.19
LSM2-208ENST00000375661 RBAK-RBAKDNI3L0D1 243 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 STXBP3O00186 592 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 TBX10O75333 385 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 TCF7P36402 384 aaPredicted RBP13.88□□□□□ -0.19
LSM2-208ENST00000375661 DLX2Q07687 328 aaPredicted RBP13.88□□□□□ -0.19
LSM2-208ENST00000375661 PPFIA1Q13136 1202 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 ADAM15Q13444 863 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 NTRK3Q16288 839 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 FBXO47Q5MNV8 452 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 RNF135Q8IUD6 432 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 CMTR2Q8IYT2 770 aaKnown RBP13.88□□□□□ -0.19
LSM2-208ENST00000375661 CCDC82Q8N4S0 544 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 EDAQ92838 391 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 GPRASP2Q96D09 838 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 PRRX2Q99811 253 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 SPZ1Q9BXG8 430 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 FTHL17Q9BXU8 183 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
LSM2-208ENST00000375661 TUBE1Q9UJT0 475 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 PLAGL2Q9UPG8 496 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 CNTNAP5Q8WYK1 1306 aa13.88□□□□□ -0.19
LSM2-208ENST00000375661 PLXNA4Q9HCM2 1894 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 PFKFB2O60825 505 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
LSM2-208ENST00000375661 EYA4O95677 639 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 SCRN1Q12765 414 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 STK3Q13188 491 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 GRIK4Q16099 956 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 SEPT1Q8WYJ6 367 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
LSM2-208ENST00000375661 MSLNLQ96KJ4 702 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 SMARCAD1Q9H4L7 1026 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 MUTYHQ9UIF7 546 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 CDY2AQ9Y6F7 541 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 TECTAO75443 2155 aa13.87□□□□□ -0.19
LSM2-208ENST00000375661 CCDC196A0A1B0GTZ2 297 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 RRN3P2A6NIE6 340 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 MEIS2O14770 477 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 MAFGO15525 162 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 STAG3L1P0CL83 205 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 KCNA2P16389 499 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 MRPS6P82932 125 aaKnown RBP13.86□□□□□ -0.19
LSM2-208ENST00000375661 SP4Q02446 784 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 ST3GAL1Q11201 340 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 COASYQ13057 564 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 CAMK1Q14012 370 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 CLUL1Q15846 466 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 IER5Q5VY09 327 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 NPAS4Q8IUM7 802 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 EFHBQ8N7U6 833 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 NECAB1Q8N987 351 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 DNAJB3Q8WWF6 145 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 PIBF1Q8WXW3 757 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 RRP36Q96EU6 259 aaKnown RBP13.86□□□□□ -0.19
LSM2-208ENST00000375661 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
LSM2-208ENST00000375661 LIMCH1Q9UPQ0 1083 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 FNDC1Q4ZHG4 1894 aaPredicted RBP13.86□□□□□ -0.19
LSM2-208ENST00000375661 KMT2EQ8IZD2 1858 aa13.86□□□□□ -0.19
LSM2-208ENST00000375661 GSTTP1A0A1W2PQM5 241 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 FSD2A1L4K1 749 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 ST18O60284 1047 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 PPFIA3O75145 1194 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 NDUFV1P49821 464 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 MARCH8Q5T0T0 291 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 USP17L6PQ6QN14 398 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 SMRP1Q8NCR6 262 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 SPPL3Q8TCT6 385 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 GLG1Q92896 1179 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 IGFLR1Q9H665 355 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 ALG13Q9NP73 1137 aaKnown RBP13.85□□□□□ -0.19
LSM2-208ENST00000375661 SEC63Q9UGP8 760 aaKnown RBP13.85□□□□□ -0.19
LSM2-208ENST00000375661 TELO2Q9Y4R8 837 aa13.85□□□□□ -0.19
LSM2-208ENST00000375661 MRPL42Q9Y6G3 142 aaKnown RBP13.85□□□□□ -0.19
LSM2-208ENST00000375661 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
LSM2-208ENST00000375661 LOC730098B7Z3J9 87 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms