RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 ATP8B3O60423 1300 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 MYH7BA7E2Y1 1941 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 FRMD3A2A2Y4 597 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 GCOM1H8Y6P7 765 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-207ENST00000373573 CETN3O15182 167 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 MARCH6O60337 910 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 FAM107AO95990 144 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 MYZAPP0CAP1 466 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 ZBTB48P10074 688 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-207ENST00000373573 PTK2Q05397 1052 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 HLTFQ14527 1009 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDAC8-207ENST00000373573 HERC4Q5GLZ8 1057 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-207ENST00000373573 ZNF571Q7Z3V5 609 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-207ENST00000373573 GPBP1Q86WP2 473 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 CUL5Q93034 780 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 JMJD4Q9H9V9 463 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 ARFGEF1Q9Y6D6 1849 aa14.38□□□□□ -0.11
HDAC8-207ENST00000373573 CEP104O60308 925 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 SEC24CP53992 1094 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 HDLBPQ00341 1268 aaKnown RBP14.37□□□□□ -0.11
HDAC8-207ENST00000373573 UAP1Q16222 522 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-207ENST00000373573 GJA10Q969M2 543 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 NAP1L4Q99733 375 aaKnown RBP14.37□□□□□ -0.11
HDAC8-207ENST00000373573 KIAA1024Q9UPX6 916 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 NPHP3-ACAD11A0A0J9YXS1 232 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 PGRMC1O00264 195 aaKnown RBP14.37□□□□□ -0.11
HDAC8-207ENST00000373573 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-207ENST00000373573 CYP11B2P19099 503 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 ANXA13P27216 316 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 CRY2Q49AN0 593 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 LRRC47Q8N1G4 583 aaKnown RBP14.37□□□□□ -0.11
HDAC8-207ENST00000373573 FAM163AQ96GL9 167 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-207ENST00000373573 CABS1Q96KC9 395 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 GPR101Q96P66 508 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-207ENST00000373573 GPCPD1Q9NPB8 672 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 NAGPAQ9UK23 515 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 HDAC9Q9UKV0 1011 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 NENFQ9UMX5 172 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 FOCADQ5VW36 1801 aa14.37□□□□□ -0.11
HDAC8-207ENST00000373573 IGKV6D-41A0A0C4DH26 115 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 CCDC188H7C350 402 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 ACTN1P12814 892 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 UCHL3P15374 230 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 PRKCIP41743 596 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 MRPL12P52815 198 aaKnown RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 BIRC3Q13489 604 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 FRMD5Q7Z6J6 570 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 ADGRF4Q8IZF3 695 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 C3orf20Q8ND61 904 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 RBM17Q96I25 401 aaKnown RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.36□□□□□ -0.114e-6■■■□□ 15.2
HDAC8-207ENST00000373573 SLC12A6Q9UHW9 1150 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 GAKO14976 1311 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 PITPNM2Q9BZ72 1349 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 POTEB3A0JP26 581 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 POTECB2RU33 542 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 E7EVH7 732 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 H0YHG0 523 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 MYO1FO00160 1098 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 SLC9A1P19634 815 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 NR2F2P24468 414 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 HPDP32754 393 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 MNAT1P51948 309 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 ZNF844Q08AG5 666 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 MTMR3Q13615 1198 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 PLCB4Q15147 1175 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 ALKBH5Q6P6C2 394 aaKnown RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 POTEBQ6S5H4 581 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 C6orf89Q6UWU4 347 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 RUFY4Q6ZNE9 571 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 SLFN11Q7Z7L1 901 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 TPCN2Q8NHX9 752 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 SPAG5Q96R06 1193 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 PDGFDQ9GZP0 370 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 NEUROG2Q9H2A3 272 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 CD209Q9NNX6 404 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 GEMIN8Q9NWZ8 242 aaKnown RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 SWAP70Q9UH65 585 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 GGA1Q9UJY5 639 aa14.36□□□□□ -0.11
HDAC8-207ENST00000373573 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
HDAC8-207ENST00000373573 FLOT1O75955 427 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 AFPP02771 609 aaKnown RBP14.35□□□□□ -0.11
HDAC8-207ENST00000373573 IL1R1P14778 569 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 CTNNA1P35221 906 aaKnown RBP14.35□□□□□ -0.11
HDAC8-207ENST00000373573 GPSM2P81274 684 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 ACTN3Q08043 901 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-207ENST00000373573 DRP2Q13474 957 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 AGBL2Q5U5Z8 902 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 DDX42Q86XP3 938 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC8-207ENST00000373573 RASGEF1CQ8N431 466 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 METTL13Q8N6R0 699 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 LMBR1Q8WVP7 490 aa14.35□□□□□ -0.11
HDAC8-207ENST00000373573 GOLPH3Q9H4A6 298 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms