RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 RAD17O75943 681 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 BAG2O95816 211 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 SLC8A1P32418 973 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 USP14P54578 494 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 BPIFB4P59827 614 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 DYNLT1P63172 113 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 TNFAIP1Q13829 316 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 MUM1Q2TAK8 710 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 ANKRD40Q6AI12 368 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 CD209Q9NNX6 404 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 BARHL2Q9NY43 387 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 ANAPC5Q9UJX4 755 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 PIK3C2AO00443 1686 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 PVALEFA0A1B0GWK0 134 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 H7C0C1 242 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 AP5Z1O43299 807 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 TRIM37O94972 964 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 GH2P01242 217 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.53
CSMD2-204ENST00000373380 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
CSMD2-204ENST00000373380 ATP5OP48047 213 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 SNX16P57768 344 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 TMCO4Q5TGY1 634 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 CEP120Q8N960 986 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 N4BP2L2Q92802 583 aaPredicted RBP11.77□□□□□ -0.53
CSMD2-204ENST00000373380 ATP2A3Q93084 1043 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 SLC24A3Q9HC58 644 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 ADD3Q9UEY8 706 aaKnown RBP11.77□□□□□ -0.53
CSMD2-204ENST00000373380 POTEFA5A3E0 1075 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 ZNF185O15231 689 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 COASYQ13057 564 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 AGPAT5Q9NUQ2 364 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 CEP72Q9P209 647 aa11.77□□□□□ -0.53
CSMD2-204ENST00000373380 C1orf167Q5SNV9 1468 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 PFDN1O60925 122 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 TNNC2P02585 160 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 IGBP1P78318 339 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 IL9RQ01113 521 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 ZNF211Q13398 564 aaPredicted RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 TMED2Q15363 201 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 C10orf76Q5T2E6 689 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 RPUSD2Q8IZ73 545 aaKnown RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 CFAP61Q8NHU2 1237 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 GDAP1Q8TB36 358 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 ANKRD7Q92527 254 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 ZMYND12Q9H0C1 365 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 TOPAZ1Q8N9V7 1692 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 ZNF335Q9H4Z2 1342 aaPredicted RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 EIF3CLB5ME19 914 aaKnown RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 ZBTB5O15062 677 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 TPD52P55327 224 aaPredicted RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 TBC1D9BQ66K14 1250 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 EIF3CQ99613 913 aaKnown RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 KCNQ2O43526 872 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 YWHAEP62258 255 aaKnown RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 TMC4Q7Z404 712 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 GUF1Q8N442 669 aaKnown RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 BBOF1Q8ND07 529 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 SPATA4Q8NEY3 305 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 SLC7A3Q8WY07 619 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 RIN2Q8WYP3 895 aaPredicted RBP11.76□□□□□ -0.53
CSMD2-204ENST00000373380 RAD54LQ92698 747 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 CNKSR1Q969H4 720 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 TRIM9Q9C026 710 aa11.76□□□□□ -0.53
CSMD2-204ENST00000373380 SYNJ2BP-COX16A0A087WUM0 186 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 HMGB1P1B2RPK0 211 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 NR3C1P04150 777 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 STAT3P40763 770 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 GCLMP48507 274 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 PEX3P56589 373 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 MRPS9P82933 396 aaKnown RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 GRM4Q14833 912 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 BRDTQ58F21 947 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 ATP6V0A1Q93050 837 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 THOC1Q96FV9 657 aaKnown RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 ELAC2Q9BQ52 826 aaKnown RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 TMEM206Q9H813 350 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 EPB41L4AQ9HCS5 686 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 COX16Q9P0S2 106 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 NXF1Q9UBU9 619 aaKnown RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 HPS5Q9UPZ3 1129 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 CCDC188H7C350 402 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 INO80B-WBP1J3KQ70 363 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 P4HA1P13674 534 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 CD58P19256 250 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 STK4Q13043 487 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 NR1I3Q14994 352 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 NUGGCQ68CJ6 796 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 COG1Q8WTW3 980 aa11.75□□□□□ -0.53
CSMD2-204ENST00000373380 INO80BQ9C086 356 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-204ENST00000373380 PCDHA6Q9UN73 950 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms