RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 FAF2Q96CS3 445 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 OSBPL3Q9H4L5 887 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 SUDS3Q9H7L9 328 aaPredicted RBP12.39□□□□□ -0.43
VCL-202ENST00000372755 SH3GLB2Q9NR46 395 aa12.39□□□□□ -0.43
VCL-202ENST00000372755 KAT6BQ8WYB5 2073 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 CCDC151A5D8V7 595 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 PODXLO00592 558 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 DCTN3O75935 186 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 LMNAP02545 664 aaKnown RBP12.38□□□□□ -0.43
VCL-202ENST00000372755 PYGLP06737 847 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 KIF19Q2TAC6 998 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 SCARA5Q6ZMJ2 495 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 FRA10AC1Q70Z53 315 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 RPAINQ86UA6 219 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 GANCQ8TET4 914 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 PAGE5Q96GU1 130 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 NRBP1Q9UHY1 535 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 RCOR1Q9UKL0 485 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 G3BP2Q9UN86 482 aaKnown RBP12.38□□□□□ -0.43
VCL-202ENST00000372755 FRMD3A2A2Y4 597 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 SOWAHDA6NJG2 315 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 CCDC188H7C350 402 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 CXCR5P32302 372 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 RC3H1Q5TC82 1133 aaKnown RBP12.38□□□□□ -0.43
VCL-202ENST00000372755 ZNF212Q9UDV6 495 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 ZNF18P17022 549 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 PIP4K2CQ8TBX8 421 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 HSPH1Q92598 858 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 RBM41Q96IZ5 413 aaKnown RBP12.38□□□□□ -0.43
VCL-202ENST00000372755 TEX12Q9BXU0 123 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 ARL4CP56559 192 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 TNFAIP2Q03169 654 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 PKP1Q13835 747 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 ZBTB41Q5SVQ8 909 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 LCORLQ8N3X6 602 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 ZWILCHQ9H900 591 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 KIAA0556O60303 1618 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 RPAP1Q9BWH6 1393 aaPredicted RBP12.38□□□□□ -0.43
VCL-202ENST00000372755 K7ERI5 159 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 NPR1P16066 1061 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 FSCBQ5H9T9 825 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 TTC13Q8NBP0 860 aa12.38□□□□□ -0.43
VCL-202ENST00000372755 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
VCL-202ENST00000372755 DRP2Q13474 957 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 E2F5Q15329 346 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 ZNF667Q5HYK9 610 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 RWDD4Q6NW29 188 aaKnown RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 ANGPTL8Q6UXH0 198 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 LCA5Q86VQ0 697 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 ST13P4Q8IZP2 240 aaPredicted RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 OR6B3Q8NGW1 331 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 MMTAG2Q9BU76 263 aaKnown RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 TMEM2Q9UHN6 1383 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 WDR91A4D1P6 747 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 AP3B2Q13367 1082 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 RNF219Q5W0B1 726 aaPredicted RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 MORC4Q8TE76 937 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 SNX19Q92543 992 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 ALKBH8Q96BT7 664 aaKnown RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 DBNDD1Q9H9R9 158 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 KPNA7A9QM74 516 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 SNX2O60749 519 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 WDR75Q8IWA0 830 aaKnown RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 NCLNQ969V3 563 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 FAM167AQ96KS9 214 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 TLR7Q9NYK1 1049 aaKnown RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 ZBBXA8MT70 800 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 COPEO14579 308 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 ERFEQ4G0M1 354 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 EMBQ6PCB8 327 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 C1orf228Q6PIY5 440 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 RNF207Q6ZRF8 634 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 TRIML2Q8N7C3 387 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 SYT2Q8N9I0 419 aaPredicted RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 CENPKQ9BS16 269 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 KIAA1586Q9HCI6 787 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 SPAG7O75391 227 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 TMCC1O94876 653 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 RECQLP46063 649 aaPredicted RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 TFDP2Q14188 446 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 EXT2Q93063 718 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
VCL-202ENST00000372755 TRIM45Q9H8W5 580 aaPredicted RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 SAMSN1Q9NSI8 373 aaKnown RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
VCL-202ENST00000372755 MIF4GDA9UHW6 222 aaKnown RBP12.36□□□□□ -0.43
VCL-202ENST00000372755 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 NR1H3Q13133 447 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 SPARCL1Q14515 664 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 UBE2SQ16763 222 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 AP1M1Q9BXS5 423 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 KRT38O76015 456 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 ALKBH5Q6P6C2 394 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms