RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 MAN1B1Q9UKM7 699 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 PCDHA10Q9Y5I2 948 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 DOCK5Q9H7D0 1870 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 ATG7O95352 703 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 RGS2P41220 211 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 FCGRTP55899 365 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 CNNM4Q6P4Q7 775 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 GSDMAQ96QA5 445 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 LXNQ9BS40 222 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 TRIM9Q9C026 710 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 ZNF215Q9UL58 517 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-206ENST00000372077 SAMM50Q9Y512 469 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 FARP2O94887 1054 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-206ENST00000372077 LYPLA2O95372 231 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 TPM3P06753 285 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 PLA2G4BP0C869 781 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 ZSCAN20P17040 1043 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-206ENST00000372077 NLRP12P59046 1061 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 PTPN14Q15678 1187 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 LY6KQ17RY6 165 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 ABHD15Q6UXT9 468 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 SCFD2Q8WU76 684 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 LRRC27Q9C0I9 530 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 PDGFCQ9NRA1 345 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 EYA4O95677 639 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 IGHA2P01877 340 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 SLC12A3P55017 1021 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 ACTR2P61160 394 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 TRIML1Q8N9V2 468 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 BANK1Q8NDB2 785 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 ZSWIM4Q9H7M6 989 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 TELO2Q9Y4R8 837 aa20.5■□□□□ 0.87
VEGFA-206ENST00000372077 PSMC4P43686 418 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 QARSP47897 775 aaKnown RBP20.49■□□□□ 0.87
VEGFA-206ENST00000372077 CCZ1BP86790 482 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 CCZ1P86791 482 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-206ENST00000372077 TTLL4Q14679 1199 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 SYT2Q8N9I0 419 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-206ENST00000372077 TRIM47Q96LD4 638 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 NACC1Q96RE7 527 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 MYMKA6NI61 221 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 TRPA1O75762 1119 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 IRF5Q13568 498 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 MORC3Q14149 939 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 OLFML2BQ68BL8 750 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 METTL7BQ6UX53 244 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 APBA2Q99767 749 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 ARHGAP39Q9C0H5 1083 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 ABHD16BQ9H3Z7 469 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 KLRC4O43908 158 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 GGPS1O95749 300 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 SP3Q02447 781 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 DHX8Q14562 1220 aaKnown RBP20.49■□□□□ 0.87
VEGFA-206ENST00000372077 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
VEGFA-206ENST00000372077 TRMT44Q8IYL2 757 aaKnown RBP20.49■□□□□ 0.87
VEGFA-206ENST00000372077 FLRT1Q9NZU1 646 aa20.49■□□□□ 0.87
VEGFA-206ENST00000372077 PSAPP07602 524 aa20.48■□□□□ 0.87
VEGFA-206ENST00000372077 PSMC5P62195 406 aa20.48■□□□□ 0.87
VEGFA-206ENST00000372077 C4orf19Q8IY42 314 aa20.48■□□□□ 0.87
VEGFA-206ENST00000372077 RPN1P04843 607 aaKnown RBP20.48■□□□□ 0.87
VEGFA-206ENST00000372077 TXNP10599 105 aaKnown RBP20.48■□□□□ 0.87
VEGFA-206ENST00000372077 CYP2B6P20813 491 aa20.48■□□□□ 0.87
VEGFA-206ENST00000372077 BMP6P22004 513 aa20.48■□□□□ 0.87
VEGFA-206ENST00000372077 ARMCX5Q6P1M9 558 aa20.48■□□□□ 0.87
VEGFA-206ENST00000372077 ZSWIM8A7E2V4 1837 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 SUPT20HL2P0C7V6 817 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 GTF2F1P35269 517 aaKnown RBP eCLIP20.47■□□□□ 0.873e-11■■■■■ 42.3
VEGFA-206ENST00000372077 ACVR2BQ13705 512 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 KCNB1Q14721 858 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 UGCGQ16739 394 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 MIS18BP1Q6P0N0 1132 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 PIGOQ8TEQ8 1089 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 IGKV6D-21A0A0A0MT36 114 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 GSTTP1A0A1W2PQM5 241 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 SORBS3O60504 671 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 CYP11B2P19099 503 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 SYT10Q6XYQ8 523 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 MLXIPQ9HAP2 919 aa20.47■□□□□ 0.87
VEGFA-206ENST00000372077 CAVIN2O95810 425 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 XRCC5P13010 732 aaKnown RBP20.46■□□□□ 0.87
VEGFA-206ENST00000372077 ELF2Q15723 593 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 CCL14Q16627 93 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 TMEM63BQ5T3F8 832 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 DDX12PQ92771 950 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 BHMT2Q9H2M3 363 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 ZBTB39O15060 712 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 SERPINC1P01008 464 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 SP4Q02446 784 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 ARSHQ5FYA8 562 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 DNAJC19Q96DA6 116 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 RMND1Q9NWS8 449 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 GABBR1Q9UBS5 961 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 WDR81Q562E7 1941 aa20.46■□□□□ 0.87
VEGFA-206ENST00000372077 DKC1O60832 514 aaKnown RBP eCLIP20.45■□□□□ 0.86
VEGFA-206ENST00000372077 CAP1Q01518 475 aa20.45■□□□□ 0.86
VEGFA-206ENST00000372077 SWSAP1Q6NVH7 229 aa20.45■□□□□ 0.86
VEGFA-206ENST00000372077 GPBP1Q86WP2 473 aa20.45■□□□□ 0.86
VEGFA-206ENST00000372077 CREBRFQ8IUR6 639 aa20.45■□□□□ 0.86
VEGFA-206ENST00000372077 CCDC60Q8IWA6 550 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-206ENST00000372077 DHX37Q8IY37 1157 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms