RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ABT1Q9ULW3 272 aaKnown RBP29.16■■■□□ 2.26
ATPAF1-202ENST00000371937 FAM13AO94988 1023 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 RARRES1P49788 294 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 TAF1CQ15572 869 aaPredicted RBP29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 PADI6Q6TGC4 694 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 EEPD1Q7L9B9 569 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 SP4Q02446 784 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 LRRC63Q05C16 580 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 ANKRD40Q6AI12 368 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 SWSAP1Q6NVH7 229 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 OTUD6AQ7L8S5 288 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 PLEKHH3Q7Z736 793 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 ZNF467Q7Z7K2 595 aaPredicted RBP29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 CSGALNACT2Q8N6G5 542 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 HHIPL1Q96JK4 782 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 TBC1D7Q9P0N9 293 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 SEL1LQ9UBV2 794 aa29.15■■■□□ 2.26
ATPAF1-202ENST00000371937 PLXNB2O15031 1838 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 ATG7O95352 703 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 SUPT20HL2P0C7V6 817 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 SREBF2Q12772 1141 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 LRRC41Q15345 812 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 SFR1Q86XK3 245 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 IFNL1Q8IU54 200 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 SEMA6BQ9H3T3 888 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 PARVGQ9HBI0 331 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 OLFML3Q9NRN5 406 aa29.14■■■□□ 2.26
ATPAF1-202ENST00000371937 ADGRA2Q96PE1 1338 aa29.14■■■□□ 2.25
ATPAF1-202ENST00000371937 TMEM88BA6NKF7 163 aa29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 GRB14Q14449 540 aa29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 TSG101Q99816 390 aa29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 DUSP9Q99956 384 aaKnown RBP29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 SRRTQ9BXP5 876 aaKnown RBP29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 FAM155AB1AL88 458 aaPredicted RBP29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 RSPH10B2B2RC85 870 aa29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 FARP2O94887 1054 aaPredicted RBP29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 RSPH10BP0C881 870 aa29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 METTL7BQ6UX53 244 aa29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 NAP1L5Q96NT1 182 aaPredicted RBP29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 TIPINQ9BVW5 301 aa29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 CPA4Q9UI42 421 aa29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 DDX41Q9UJV9 622 aaKnown RBP29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 DIS3Q9Y2L1 958 aaKnown RBP29.13■■■□□ 2.25
ATPAF1-202ENST00000371937 BACH1O14867 736 aa29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 ZNF131P52739 623 aa29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 TCP11X2Q5H9J9 407 aa29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 ARMCX2Q7L311 632 aa29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 DPP9Q86TI2 863 aa29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 GLIS3Q8NEA6 775 aa29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 LIMA1Q9UHB6 759 aaKnown RBP29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 DOCK5Q9H7D0 1870 aa29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 SYNGAP1Q96PV0 1343 aa29.12■■■□□ 2.25
ATPAF1-202ENST00000371937 LRRC10BA6NIK2 292 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 KCNJ18B7U540 433 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 SORBS3O60504 671 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 FGFR1OPO95684 399 aaKnown RBP29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 EEF1GP26641 437 aaKnown RBP29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 KCNJ12Q14500 433 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 FILIP1LQ4L180 1135 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 XKR9Q5GH70 373 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 CCDC60Q8IWA6 550 aaPredicted RBP29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 FAM114A1Q8IWE2 563 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 MYCT1Q8N699 235 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 MRPL44Q9H9J2 332 aaKnown RBP29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 MLXIPQ9HAP2 919 aa29.11■■■□□ 2.25
ATPAF1-202ENST00000371937 SLC15A5A6NIM6 579 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 GGPS1O95749 300 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 UTP14CQ5TAP6 766 aaKnown RBP29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 FBXO16Q8IX29 292 aaPredicted RBP29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 SCFD1Q8WVM8 642 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 IMPACTQ9P2X3 320 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 MAGEC2Q9UBF1 373 aaPredicted RBP29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 A0A1B0GTH6 734 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 LY6KQ17RY6 165 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 ANO5Q75V66 913 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 APTXQ7Z2E3 356 aaKnown RBP29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 SCFD2Q8WU76 684 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 SLC5A4Q9NY91 659 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 IGSF9BQ9UPX0 1349 aa29.1■■■□□ 2.25
ATPAF1-202ENST00000371937 ZNF862O60290 1169 aa29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 TOMM70O94826 608 aa29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 TTLL4Q14679 1199 aa29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 EPM2AIP1Q7L775 607 aaPredicted RBP29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 FGFBP2Q9BYJ0 223 aa29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 ZFYVE28Q9HCC9 887 aa29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 ZNF302Q9NR11 478 aa29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 TELO2Q9Y4R8 837 aa29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 MAFBQ9Y5Q3 323 aaPredicted RBP29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 PLXNA1Q9UIW2 1896 aa29.09■■■□□ 2.25
ATPAF1-202ENST00000371937 SFI1A8K8P3 1242 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 TLR2O60603 784 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 HIP1RO75146 1068 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 NR1I3Q14994 352 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 CCDC186Q7Z3E2 898 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 IRF2BP1Q8IU81 584 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 SEPT1Q8WYJ6 367 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 VTA1Q9NP79 307 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 IGKV6D-21A0A0A0MT36 114 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 ARIH2O95376 493 aa29.08■■■□□ 2.25
ATPAF1-202ENST00000371937 PRKCEQ02156 737 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms