RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TMEM260Q9NX78 707 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 ABCB11O95342 1321 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 TYW5A2RUC4 315 aaKnown RBP21.22■□□□□ 0.99
LMO4-202ENST00000370544 LDHAP00338 332 aaKnown RBP21.22■□□□□ 0.99
LMO4-202ENST00000370544 SARM1Q6SZW1 724 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 ATP8B3O60423 1300 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 PRPSAP2O60256 369 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 STXBP2Q15833 593 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 SIX6OS1Q8N1H7 587 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.22■□□□□ 0.99
LMO4-202ENST00000370544 TRIM49BA6NDI0 452 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 ARHGAP4P98171 946 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 CCDC38Q502W7 563 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 CCHCR1Q8TD31 782 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 TRIM56Q9BRZ2 755 aaKnown RBP21.22■□□□□ 0.99
LMO4-202ENST00000370544 SETBP1Q9Y6X0 1596 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 LRRD1A4D1F6 860 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 CASP1P29466 404 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 ALKBH5Q6P6C2 394 aaKnown RBP21.22■□□□□ 0.99
LMO4-202ENST00000370544 HOXC10Q9NYD6 342 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 CYP4F22Q6NT55 531 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 ARHGEF18Q6ZSZ5 1173 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 BARHL2Q9NY43 387 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 E9PMD0 336 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 ORC2Q13416 577 aaPredicted RBP21.21■□□□□ 0.99
LMO4-202ENST00000370544 RAPH1Q70E73 1250 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 CACYBPQ9HB71 228 aaKnown RBP21.21■□□□□ 0.99
LMO4-202ENST00000370544 FBXO40Q9UH90 709 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 ZHX2Q9Y6X8 837 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 ARHGEF37A1IGU5 675 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 BASP1P80723 227 aaKnown RBP21.21■□□□□ 0.99
LMO4-202ENST00000370544 SH2D4BQ5SQS7 431 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 FAM84BQ96KN1 310 aaPredicted RBP21.21■□□□□ 0.99
LMO4-202ENST00000370544 ADAMTS1Q9UHI8 967 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 DHX9Q08211 1270 aaKnown RBP21.21■□□□□ 0.99
LMO4-202ENST00000370544 FAM20AQ96MK3 541 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 WRNIP1Q96S55 665 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 TBC1D22BQ9NU19 505 aa21.21■□□□□ 0.99
LMO4-202ENST00000370544 IFNAR2P48551 515 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 SNRNP48Q6IEG0 339 aaKnown RBP21.2■□□□□ 0.98
LMO4-202ENST00000370544 PADI6Q6TGC4 694 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 ALDH8A1Q9H2A2 487 aaPredicted RBP21.2■□□□□ 0.98
LMO4-202ENST00000370544 SMYD2Q9NRG4 433 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 SLC12A6Q9UHW9 1150 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 WDR64B1ANS9 1081 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 PROM2Q8N271 834 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 FMR1NBQ8N0W7 255 aaPredicted RBP21.2■□□□□ 0.98
LMO4-202ENST00000370544 CEP72Q9P209 647 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 PNPLA7Q6ZV29 1317 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 NR3C1P04150 777 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 MSH2P43246 934 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 EP400NLQ6ZTU2 488 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 GIMAP8Q8ND71 665 aaPredicted RBP21.2■□□□□ 0.98
LMO4-202ENST00000370544 MCPH1Q8NEM0 835 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 FAM167AQ96KS9 214 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 DNAJC12Q9UKB3 198 aa21.2■□□□□ 0.98
LMO4-202ENST00000370544 LGALS16A8MUM7 142 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 KCNQ2O43526 872 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 COASYQ13057 564 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 TMED2Q15363 201 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 DYDC2Q96IM9 177 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 MXD3Q9BW11 206 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 ARMCX2Q7L311 632 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 RHOT2Q8IXI1 618 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 PVALEFA0A1B0GWK0 134 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 DR1Q01658 176 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 ATG9AQ7Z3C6 839 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 ADGRF4Q8IZF3 695 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 DNAAF3Q8N9W5 541 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 ARPP19P56211 112 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 TRIP13Q15645 432 aaPredicted RBP21.19■□□□□ 0.98
LMO4-202ENST00000370544 HDAC11Q96DB2 347 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 BPIFA3Q9BQP9 254 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 AP1M1Q9BXS5 423 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 FAM49AQ9H0Q0 323 aaPredicted RBP21.19■□□□□ 0.98
LMO4-202ENST00000370544 SCINQ9Y6U3 715 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 ORC4O43929 436 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 SUN1O94901 812 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 TRIM28Q13263 835 aaKnown RBP21.19■□□□□ 0.98
LMO4-202ENST00000370544 SCARF1Q14162 830 aa21.19■□□□□ 0.98
LMO4-202ENST00000370544 SKA2Q8WVK7 121 aaPredicted RBP21.19■□□□□ 0.98
LMO4-202ENST00000370544 PRCPP42785 496 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 IRX4P78413 519 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 SLMAPQ14BN4 828 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 PHLDB3Q6NSJ2 640 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 THNSL1Q8IYQ7 743 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 PARD6BQ9BYG5 372 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 ADCY1Q08828 1119 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 ERICH1Q86X53 443 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 ZNF526Q8TF50 670 aaPredicted RBP21.18■□□□□ 0.98
LMO4-202ENST00000370544 POTEB3A0JP26 581 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 POTECB2RU33 542 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 S100BP04271 92 aaPredicted RBP21.18■□□□□ 0.98
LMO4-202ENST00000370544 PRR29P0C7W0 189 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 KRT76Q01546 638 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 TXNRD1Q16881 649 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 POTEBQ6S5H4 581 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 SP8Q8IXZ3 490 aa21.18■□□□□ 0.98
LMO4-202ENST00000370544 RABL6Q3YEC7 729 aaPredicted RBP21.18■□□□□ 0.98
LMO4-202ENST00000370544 NSUN6Q8TEA1 469 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms