RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 ZBTB10Q96DT7 871 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 IL17RAQ96F46 866 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 LRFN3Q9BTN0 628 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 SMARCAD1Q9H4L7 1026 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 EHMT1Q9H9B1 1298 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 ANO2Q9NQ90 1003 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 JADE2Q9NQC1 790 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 PCDHGA10Q9Y5H3 936 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
CLRN3-201ENST00000368671 FAM86C2PA6NEL3 165 aa11.84□□□□□ -0.51
CLRN3-201ENST00000368671 H3BQ06 376 aaPredicted RBP11.84□□□□□ -0.51
CLRN3-201ENST00000368671 CSPG5O95196 566 aa11.84□□□□□ -0.51
CLRN3-201ENST00000368671 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
CLRN3-201ENST00000368671 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
CLRN3-201ENST00000368671 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
CLRN3-201ENST00000368671 RPAINQ86UA6 219 aa11.84□□□□□ -0.51
CLRN3-201ENST00000368671 FAM122AQ96E09 287 aa11.84□□□□□ -0.51
CLRN3-201ENST00000368671 PGBD1Q96JS3 809 aa11.84□□□□□ -0.51
CLRN3-201ENST00000368671 FAM49AQ9H0Q0 323 aaPredicted RBP11.84□□□□□ -0.51
CLRN3-201ENST00000368671 NSUN3Q9H649 340 aaKnown RBP11.84□□□□□ -0.51
CLRN3-201ENST00000368671 ADGRA3Q8IWK6 1321 aa11.84□□□□□ -0.51
CLRN3-201ENST00000368671 KIAA1671Q9BY89 1806 aa11.83□□□□□ -0.51
CLRN3-201ENST00000368671 ENPP3O14638 875 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 INSRRP14616 1297 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 PLA2G5P39877 138 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 NAPAP54920 295 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 MRPS6P82932 125 aaKnown RBP11.83□□□□□ -0.52
CLRN3-201ENST00000368671 FBXO47Q5MNV8 452 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 MARCH8Q5T0T0 291 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 WWC2Q6AWC2 1192 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 TSHZ1Q6ZSZ6 1077 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 FAM178BQ8IXR5 827 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 GJD3Q8N144 294 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 TCEANC2Q96MN5 208 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 PCYT2Q99447 389 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 SDF4Q9BRK5 362 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 JPH1Q9HDC5 661 aaPredicted RBP11.83□□□□□ -0.52
CLRN3-201ENST00000368671 CLDND1Q9NY35 253 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 SLC9A2Q9UBY0 812 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 HCN4Q9Y3Q4 1203 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 CNTNAP5Q8WYK1 1306 aa11.83□□□□□ -0.52
CLRN3-201ENST00000368671 LOXHD1Q8IVV2 1947 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 MBLAC1A4D2B0 266 aaPredicted RBP11.82□□□□□ -0.52
CLRN3-201ENST00000368671 GRXCR2A6NFK2 248 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 RRN3P2A6NIE6 340 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 MAFGO15525 162 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 CD52P31358 61 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 TMEM62Q0P6H9 643 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 BTG3Q14201 252 aaPredicted RBP11.82□□□□□ -0.52
CLRN3-201ENST00000368671 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
CLRN3-201ENST00000368671 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 TRAPPC12Q8WVT3 735 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 PABPC5Q96DU9 382 aaKnown RBP11.82□□□□□ -0.52
CLRN3-201ENST00000368671 NEK1Q96PY6 1258 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 ANO3Q9BYT9 981 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 KCNH7Q9NS40 1196 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 RBM28Q9NW13 759 aaKnown RBP11.82□□□□□ -0.52
CLRN3-201ENST00000368671 RWDD3Q9Y3V2 267 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 TRPV2Q9Y5S1 764 aa11.82□□□□□ -0.52
CLRN3-201ENST00000368671 C5orf67F2Z3F1 127 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 PI4K2BG5E9Z4 385 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 M0QZ92 97 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 DDX39AO00148 427 aaKnown RBP11.81□□□□□ -0.52
CLRN3-201ENST00000368671 ARHGAP33O14559 1287 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 GRM6O15303 877 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 RB1P06400 928 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 LINC00271P0C7V0 271 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 ARP10275 920 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 IBSPP21815 317 aaPredicted RBP11.81□□□□□ -0.52
CLRN3-201ENST00000368671 BMPR1AP36894 532 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 ADCY7P51828 1080 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 ACTR2P61160 394 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 LSM11P83369 360 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLRN3-201ENST00000368671 PLCB4Q15147 1175 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 RTN1Q16799 776 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 IER5Q5VY09 327 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 APOA5Q6Q788 366 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 LINC01599Q8WXQ3 324 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 TNPO1Q92973 898 aaKnown RBP11.81□□□□□ -0.52
CLRN3-201ENST00000368671 C11orf84Q9BUA3 381 aaPredicted RBP11.81□□□□□ -0.52
CLRN3-201ENST00000368671 AGO3Q9H9G7 860 aaKnown RBP11.81□□□□□ -0.52
CLRN3-201ENST00000368671 RIC8AQ9NPQ8 531 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 C11orf16Q9NQ32 467 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 BRPF3Q9ULD4 1205 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 XIRP2A4UGR9 3374 aa11.81□□□□□ -0.52
CLRN3-201ENST00000368671 SMCO2A6NFE2 343 aa11.8□□□□□ -0.52
CLRN3-201ENST00000368671 GOLGA8AA7E2F4 631 aa11.8□□□□□ -0.52
CLRN3-201ENST00000368671 GOLGA8BA8MQT2 603 aa11.8□□□□□ -0.52
CLRN3-201ENST00000368671 ZBTB43O43298 467 aa11.8□□□□□ -0.52
CLRN3-201ENST00000368671 GPR37L1O60883 481 aa11.8□□□□□ -0.52
CLRN3-201ENST00000368671 DGKIO75912 1065 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms