RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 MAGEA9P43362 315 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 VPS41P49754 854 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 CCDC38Q502W7 563 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 FAM182AQ5T1J6 154 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 GALNT17Q6IS24 598 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 TADA2BQ86TJ2 420 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 AK8Q96MA6 479 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 SCLT1Q96NL6 688 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 TSGA10Q9BZW7 698 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 LAMB1P07942 1786 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 ZNF233A6NK53 670 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 FOXO6A8MYZ6 492 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 CFBP00751 764 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 SSTR3P32745 418 aaPredicted RBP9.71□□□□□ -0.85
THBS3-201ENST00000368378 PRPHP41219 470 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 EPHB4P54760 987 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 TUBB4BP68371 445 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 COG2Q14746 738 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 E2F5Q15329 346 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 CENPPQ6IPU0 288 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 PEX26Q7Z412 305 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 IFT20Q8IY31 132 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 DAGLBQ8NCG7 672 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 MRRFQ96E11 262 aaKnown RBP9.71□□□□□ -0.85
THBS3-201ENST00000368378 C7orf25Q9BPX7 421 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 JPH2Q9BR39 696 aaPredicted RBP9.71□□□□□ -0.85
THBS3-201ENST00000368378 RTFDC1Q9BY42 306 aaPredicted RBP9.71□□□□□ -0.85
THBS3-201ENST00000368378 ZNF287Q9HBT7 754 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 GGA1Q9UJY5 639 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 NOVA2Q9UNW9 492 aaKnown RBP9.71□□□□□ -0.85
THBS3-201ENST00000368378 KIAA1551Q9HCM1 1747 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 TTI1O43156 1089 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 ATMINO43313 823 aaPredicted RBP9.71□□□□□ -0.86
THBS3-201ENST00000368378 OPA1O60313 960 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 MED24O75448 989 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 RPS6KA4O75676 772 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 CALCAP01258 141 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 MYL1P05976 194 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 NR1D1P20393 614 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 GJC1P36383 396 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 PPFIA1Q13136 1202 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 KRT71Q3SY84 523 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 GLYCTKQ8IVS8 523 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 AENQ8WTP8 325 aaKnown RBP9.71□□□□□ -0.86
THBS3-201ENST00000368378 BAP1Q92560 729 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 FAM212AQ96EL1 285 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 CAMKK2Q96RR4 588 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 HDAC9Q9UKV0 1011 aa9.71□□□□□ -0.86
THBS3-201ENST00000368378 CEP350Q5VT06 3117 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 NMT1P30419 496 aaKnown RBP9.7□□□□□ -0.86
THBS3-201ENST00000368378 SP4Q02446 784 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 ALKBH5Q6P6C2 394 aaKnown RBP9.7□□□□□ -0.86
THBS3-201ENST00000368378 CCDC174Q6PII3 467 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 OTUD6AQ7L8S5 288 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 PPM1EQ8WY54 764 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 GLG1Q92896 1179 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 THOC1Q96FV9 657 aaKnown RBP9.7□□□□□ -0.86
THBS3-201ENST00000368378 ERGIC2Q96RQ1 377 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 FAM118BQ9BPY3 351 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 SPZ1Q9BXG8 430 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 CUEDC2Q9H467 287 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 JMJD4Q9H9V9 463 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 POLLQ9UGP5 575 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 AJAP1Q9UKB5 411 aaPredicted RBP9.7□□□□□ -0.86
THBS3-201ENST00000368378 NR2E1Q9Y466 385 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 CEP83Q9Y592 693 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 LAMB2P55268 1798 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 GOLGA6L7A0A1B0GV03 622 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 PHF20L1A8MW92 1017 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 CETN3O15182 167 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 CORO7P57737 925 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 GRAPQ13588 217 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 C2CD6Q53TS8 623 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 LRRC55Q6ZSA7 311 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 ZNF571Q7Z3V5 609 aaPredicted RBP9.7□□□□□ -0.86
THBS3-201ENST00000368378 GRAPLQ8TC17 118 aaPredicted RBP9.7□□□□□ -0.86
THBS3-201ENST00000368378 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 ANKS1AQ92625 1134 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 HAS1Q92839 578 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 NCAPGQ9BPX3 1015 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 CD248Q9HCU0 757 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 PSD3Q9NYI0 1048 aa9.7□□□□□ -0.86
THBS3-201ENST00000368378 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
THBS3-201ENST00000368378 TISP43B9A030 160 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 EIF3HO15372 352 aaKnown RBP eCLIP9.69□□□□□ -0.86
THBS3-201ENST00000368378 CCDC65Q8IXS2 484 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 MYCT1Q8N699 235 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 NEDD1Q8NHV4 660 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 SCFD1Q8WVM8 642 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 CUL5Q93034 780 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 LZTS2Q9BRK4 669 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 NEUROG2Q9H2A3 272 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 GCNT4Q9P109 453 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 ARMCX3Q9UH62 379 aaPredicted RBP9.69□□□□□ -0.86
THBS3-201ENST00000368378 WNK3Q9BYP7 1800 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 GRID2IPA4D2P6 1211 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 NOL4O94818 638 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 FGFR1OPO95684 399 aaKnown RBP9.69□□□□□ -0.86
THBS3-201ENST00000368378 FGGP02679 453 aa9.69□□□□□ -0.86
THBS3-201ENST00000368378 TUBBP07437 444 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms