RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 GPT2Q8TD30 523 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 LPAR1Q92633 364 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 MAP7D2Q96T17 732 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 ZNF341Q9BYN7 854 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 TSPY26PQ9H489 355 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 SOX17Q9H6I2 414 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 TXNRD2Q9NNW7 524 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 VTI1BQ9UEU0 232 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 SMC3Q9UQE7 1217 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 AKAP2Q9Y2D5 859 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 SNX14Q9Y5W7 946 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 ATRNL1Q5VV63 1379 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 LAMA5O15230 3695 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 HELZ2Q9BYK8 2649 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 ELP1O95163 1332 aa7.52□□□□□ -1.2
ECHDC1-202ENST00000368289 SPEF2Q9C093 1822 aa7.52□□□□□ -1.2
ECHDC1-202ENST00000368289 FSCN2O14926 492 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 STX6O43752 255 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 RRP9O43818 475 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 PDE8AO60658 829 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 NBPF7P0C2Y1 421 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 USP17L7P0C7H9 530 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 SPATA31C1P0DKV0 1188 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 CRKP46108 304 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 RABGGTBP53611 331 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 FPGSQ05932 587 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 PCDH1Q08174 1060 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 C19orf57Q0VDD7 668 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 NECTIN1Q15223 517 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 GLIPR1L2Q4G1C9 344 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 APOBEC3HQ6NTF7 200 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 GADL1Q6ZQY3 521 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 CCDC129Q6ZRS4 1044 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 C15orf52Q6ZUT6 534 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 RUFY3Q7L099 469 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 VN1R5Q7Z5H4 357 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 SPRED2Q7Z698 418 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 FBXO11Q86XK2 927 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 FMR1NBQ8N0W7 255 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 SMCR8Q8TEV9 937 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 MAP4K1Q92918 833 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 FERMT2Q96AC1 680 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 VWCEQ96DN2 955 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 CEP44Q9C0F1 390 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 COPRSQ9NQ92 184 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 TTF2Q9UNY4 1162 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 COG5Q9UP83 839 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 MAP3K2Q9Y2U5 619 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 ZHX2Q9Y6X8 837 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 PTPRFP10586 1907 aa7.52□□□□□ -1.21
ECHDC1-202ENST00000368289 DCXO43602 365 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 ESRRAP11474 423 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 ALADP13716 330 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 IL9P15248 144 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 CDC25BP30305 580 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 ADCYAP1R1P41586 468 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 ID4P47928 161 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 PPP2R3AQ06190 1150 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 SUZ12Q15022 739 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 LRRFIP1Q32MZ4 808 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 ATL3Q6DD88 541 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 FAM83AQ86UY5 434 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 ZFPM1Q8IX07 1006 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 NACC1Q96RE7 527 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 IL1RAPL2Q9NP60 686 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 GPR108Q9NPR9 543 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 PDRG1Q9NUG6 133 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 PALD1Q9ULE6 856 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 ZKSCAN5Q9Y2L8 839 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 KIF3AQ9Y496 699 aa7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 DSPP15924 2871 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-202ENST00000368289 A0A0G2JMZ2 1700 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 LPXNO60711 386 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 TAF5LO75529 589 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 F13A1P00488 732 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 PCCAP05165 728 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 ACRP10323 421 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 ATP5JP18859 108 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 FAAP100Q0VG06 881 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 PKP1Q13835 747 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 SETDB1Q15047 1291 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 RABL6Q3YEC7 729 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 ANO1Q5XXA6 986 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 ADAMTSL4Q6UY14 1074 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 ZNF365Q70YC5 407 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 FASTKD5Q7L8L6 764 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 SLC7A3Q8WY07 619 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 SCAND2PQ9GZW5 306 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 PORCNQ9H237 461 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 MORF4L1Q9UBU8 362 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 USP25Q9UHP3 1055 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 AGTPBP1Q9UPW5 1226 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 TACC3Q9Y6A5 838 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 GAKO14976 1311 aa7.5□□□□□ -1.21
ECHDC1-202ENST00000368289 GBF1Q92538 1859 aa7.49□□□□□ -1.21
ECHDC1-202ENST00000368289 GOLGA6L6A8MZA4 724 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms