RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 C3orf20Q8ND61 904 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 HIPK4Q8NE63 616 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 EDEM3Q9BZQ6 932 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 SMYD2Q9NRG4 433 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 A0A1B0GTH6 734 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
FBXO28-201ENST00000366862 SRGAP2BP0DMP2 458 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 IL1RL1Q01638 556 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 TRPC5Q9UL62 973 aaPredicted RBP16.86■□□□□ 0.29
FBXO28-201ENST00000366862 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
FBXO28-201ENST00000366862 BCAMP50895 628 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 DEPDC1BQ8WUY9 529 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 DDX47Q9H0S4 455 aaKnown RBP16.86■□□□□ 0.29
FBXO28-201ENST00000366862 CLIC2O15247 247 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 H2AFXP16104 143 aaPredicted RBP16.86■□□□□ 0.29
FBXO28-201ENST00000366862 PHKA1P46020 1223 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 CYP4A11Q02928 519 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 DNAJC24Q6P3W2 148 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 ZBTB8OSQ8IWT0 167 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 HOOK2Q96ED9 719 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 ZC4H2Q9NQZ6 224 aa16.86■□□□□ 0.29
FBXO28-201ENST00000366862 DNAJC17Q9NVM6 304 aaKnown RBP16.86■□□□□ 0.29
FBXO28-201ENST00000366862 ERVV-2B6SEH9 535 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 TJP3O95049 919 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 FAM107AO95990 144 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 PUS7LQ9H0K6 701 aaKnown RBP16.85■□□□□ 0.29
FBXO28-201ENST00000366862 LCMT1Q9UIC8 334 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 ZNF711Q9Y462 761 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 USP15Q9Y4E8 981 aaPredicted RBP16.85■□□□□ 0.29
FBXO28-201ENST00000366862 CCDC22O60826 627 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 TMOD1P28289 359 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 MTF1Q14872 753 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 CEP19Q96LK0 163 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 TTC1Q99614 292 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 CACYBPQ9HB71 228 aaKnown RBP16.85■□□□□ 0.29
FBXO28-201ENST00000366862 TRIM49BA6NDI0 452 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 SASH1O94885 1247 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 PLA2G4BP0C869 781 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 CNBD1Q8NA66 436 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 SPC25Q9HBM1 224 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 LIMA1Q9UHB6 759 aaKnown RBP16.85■□□□□ 0.29
FBXO28-201ENST00000366862 TMEM191BP0C7N4 346 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 PSMD7P51665 324 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 CYFIP2Q96F07 1278 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 CFAP36Q96G28 342 aa16.85■□□□□ 0.29
FBXO28-201ENST00000366862 PVALEFA0A1B0GWK0 134 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 ESYT2A0FGR8 921 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 KRT38O76015 456 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
FBXO28-201ENST00000366862 DPF2Q92785 391 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 SENP1Q9P0U3 644 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 FOXP2O15409 715 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 TMEM154Q6P9G4 183 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 MOV10L1Q9BXT6 1211 aaKnown RBP16.84■□□□□ 0.29
FBXO28-201ENST00000366862 CCDC87Q9NVE4 849 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 GSTA4O15217 222 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 HSPA4LO95757 839 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 ABCD1P33897 745 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 RCAN1P53805 252 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 TAF12Q16514 161 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 SMYD3Q9H7B4 428 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 FHOD1Q9Y613 1164 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 EIF4E1BA6NMX2 242 aaKnown RBP16.84■□□□□ 0.29
FBXO28-201ENST00000366862 GOLGA8CPA6NN73 597 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 MXI1P50539 228 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 GPC5P78333 572 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 RARS2Q5T160 578 aaKnown RBP16.84■□□□□ 0.29
FBXO28-201ENST00000366862 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
FBXO28-201ENST00000366862 KRT82Q9NSB4 513 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 SATB2Q9UPW6 733 aa16.84■□□□□ 0.29
FBXO28-201ENST00000366862 ZBBXA8MT70 800 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 ALCAMQ13740 583 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 STAG2Q8N3U4 1231 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 SH2D3CQ8N5H7 860 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 RBM41Q96IZ5 413 aaKnown RBP16.83■□□□□ 0.29
FBXO28-201ENST00000366862 TRIM33Q9UPN9 1127 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 PCDHA1Q9Y5I3 950 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 TSGA10IPQ3SY00 556 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 FAM83BQ5T0W9 1011 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 LRRC31Q6UY01 552 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 TRPM8Q7Z2W7 1104 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 CABLES1Q8TDN4 633 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 NGLY1Q96IV0 654 aa16.83■□□□□ 0.29
FBXO28-201ENST00000366862 PRMT1Q99873 361 aaKnown RBP16.83■□□□□ 0.29
FBXO28-201ENST00000366862 POLR3CQ9BUI4 534 aaPredicted RBP16.83■□□□□ 0.29
FBXO28-201ENST00000366862 LRRC14Q15048 493 aa16.83■□□□□ 0.28
FBXO28-201ENST00000366862 SGSM3Q96HU1 749 aa16.83■□□□□ 0.28
FBXO28-201ENST00000366862 PUS3Q9BZE2 481 aaKnown RBP16.83■□□□□ 0.28
FBXO28-201ENST00000366862 PSMD14O00487 310 aa16.83■□□□□ 0.28
FBXO28-201ENST00000366862 SERPINB4P48594 390 aa16.83■□□□□ 0.28
FBXO28-201ENST00000366862 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.28
FBXO28-201ENST00000366862 KCTD6Q8NC69 237 aa16.83■□□□□ 0.28
FBXO28-201ENST00000366862 TTLL11Q8NHH1 800 aa16.83■□□□□ 0.28
FBXO28-201ENST00000366862 DNAJC9Q8WXX5 260 aa16.83■□□□□ 0.28
FBXO28-201ENST00000366862 NACC1Q96RE7 527 aa16.83■□□□□ 0.28
FBXO28-201ENST00000366862 hCG_2014768A0A024R1R8 64 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 961 ms