RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NAA35Q5VZE5 725 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 PDXDC1Q6P996 788 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 FOXP3Q9BZS1 431 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 CENPUQ71F23 418 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 ADAT2Q7Z6V5 191 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 PTPN22Q9Y2R2 807 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 COBLO75128 1261 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 ATP1A1P05023 1023 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 SLC18A3Q16572 532 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 PTPN21Q16825 1174 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 ANO3Q9BYT9 981 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 PDE4DIPQ5VU43 2346 aa12.72□□□□□ -0.37
CDC42BPA-202ENST00000366764 SRGAP2O75044 1071 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 TXNRD1Q16881 649 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 TBC1D9BQ66K14 1250 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 ADAMTS13Q76LX8 1427 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 DLATP10515 647 aaKnown RBP12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.379e-7■■■□□ 17
CDC42BPA-202ENST00000366764 EPS15L1Q9UBC2 864 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 PI4KBQ9UBF8 816 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 TRIM49BA6NDI0 452 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 LRRN2O75325 713 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 VPS41P49754 854 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 CCNI2Q6ZMN8 369 aaPredicted RBP12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 HVCN1Q96D96 273 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 RBM41Q96IZ5 413 aaKnown RBP12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZNF577Q9BSK1 485 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 FAM96AQ9H5X1 160 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 SERPINA10Q9UK55 444 aa12.71□□□□□ -0.37
CDC42BPA-202ENST00000366764 SURF1Q15526 300 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 STAG2Q8N3U4 1231 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 RDH13Q8NBN7 331 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 TMEM60Q9H2L4 133 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 PRLRP16471 622 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 LRRC41Q15345 812 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 AGBL2Q5U5Z8 902 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 ARHGEF16Q5VV41 709 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 DCAF15Q66K64 600 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 CCDC127Q96BQ5 260 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 TMEM47Q9BQJ4 181 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 ZNF277Q9NRM2 450 aaPredicted RBP12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 ARHGAP42A6NI28 874 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 DDX39AO00148 427 aaKnown RBP12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 FDPSP14324 419 aaKnown RBP12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 GARSP41250 739 aaKnown RBP12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 DLGAP5Q15398 846 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 NSMFQ6X4W1 530 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 CFAP61Q8NHU2 1237 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 KCND2Q9NZV8 630 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 INTUQ9ULD6 942 aa12.71□□□□□ -0.38
CDC42BPA-202ENST00000366764 CORO7P57737 925 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 SCYL3Q8IZE3 742 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 HGSO14964 777 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 DAPK3O43293 454 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 MAGOHP61326 146 aaKnown RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 CCT6BQ92526 530 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 NCAPGQ9BPX3 1015 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 MYBL1P10243 752 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 MSH2P43246 934 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 ENOSF1Q7L5Y1 443 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 MRRFQ96E11 262 aaKnown RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 KIAA1586Q9HCI6 787 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 SUGT1Q9Y2Z0 365 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 FHOD1Q9Y613 1164 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 ANKRD12Q6UB98 2062 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 RFX5P48382 616 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 SP4Q02446 784 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 DNAJC7Q99615 494 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 TCP10Q12799 353 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 FIGNQ5HY92 759 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 UBE2TQ9NPD8 197 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 UBE4BO95155 1302 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 C3P01024 1663 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 MED7O43513 233 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 TJP3O95049 919 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 BMP3P12645 472 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 USP17L2Q6R6M4 530 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 PCGF5Q86SE9 256 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 STOML1Q9UBI4 398 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 CYP2D7A0A087X1C5 515 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 SLC12A2P55011 1212 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 GPC5P78333 572 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 GFPT1Q06210 699 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 SYDE2Q5VT97 1194 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 TRIM72Q6ZMU5 477 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 MAEAQ7L5Y9 396 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 PDCD7Q8N8D1 485 aaKnown RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 CRCPO75575 148 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 TPD52P55327 224 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 ASPHQ12797 758 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 MTF1Q14872 753 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms