RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ZNF287Q9HBT7 754 aa21.44■■□□□ 1.02
TRIM58-201ENST00000366481 L3MBTL1Q9Y468 752 aa21.44■■□□□ 1.02
TRIM58-201ENST00000366481 TRAPPC3O43617 180 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 POLR2FP61218 127 aaKnown RBP21.43■■□□□ 1.02
TRIM58-201ENST00000366481 RPS6KA1Q15418 735 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 C6orf89Q6UWU4 347 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 BARGINQ6ZT62 677 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 MTMR9Q96QG7 549 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 ERGIC2Q96RQ1 377 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 KIAA1024Q9UPX6 916 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 VIMP08670 466 aaKnown RBP21.43■■□□□ 1.02
TRIM58-201ENST00000366481 ADGRF4Q8IZF3 695 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 DDX47Q9H0S4 455 aaKnown RBP21.43■■□□□ 1.02
TRIM58-201ENST00000366481 ADAMTS1Q9UHI8 967 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 GGT7Q9UJ14 662 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 PCDHAC2Q9Y5I4 1007 aa21.43■■□□□ 1.02
TRIM58-201ENST00000366481 GPR75-ASB3A0A0A6YYF3 556 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 KLRC1P26715 233 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
TRIM58-201ENST00000366481 UNC13DQ70J99 1090 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 FAXDC2Q96IV6 333 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 MTMR4Q9NYA4 1195 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 RNF14Q9UBS8 474 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 DAGLAQ9Y4D2 1042 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 POTEB3A0JP26 581 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 DCDC2CA8MYV0 355 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 POTECB2RU33 542 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 TNFRSF8P28908 595 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 EPS15P42566 896 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 POTEBQ6S5H4 581 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 RAD54LQ92698 747 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 DDX25Q9UHL0 483 aaKnown RBP21.42■■□□□ 1.02
TRIM58-201ENST00000366481 MYL1P05976 194 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 ERVK-9P63128 1117 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 CDK17Q00537 523 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 CCDC197Q8NCU1 140 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 LZTS2Q9BRK4 669 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 JMJD4Q9H9V9 463 aa21.42■■□□□ 1.02
TRIM58-201ENST00000366481 ZNF844Q08AG5 666 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 MAN2A1Q16706 1144 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 SFMBT2Q5VUG0 894 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 ZNF572Q7Z3I7 529 aaPredicted RBP21.41■■□□□ 1.02
TRIM58-201ENST00000366481 LSM14BQ9BX40 385 aaKnown RBP21.41■■□□□ 1.02
TRIM58-201ENST00000366481 PACSIN1Q9BY11 444 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 CUEDC2Q9H467 287 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 A0A1W2PQJ5 194 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 DHX9Q08211 1270 aaKnown RBP21.41■■□□□ 1.02
TRIM58-201ENST00000366481 ZSCAN29Q8IWY8 852 aaPredicted RBP21.41■■□□□ 1.02
TRIM58-201ENST00000366481 CD302Q8IX05 232 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 ATP6V0A4Q9HBG4 840 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 CNOT8Q9UFF9 292 aaKnown RBP21.41■■□□□ 1.02
TRIM58-201ENST00000366481 ATP8A1Q9Y2Q0 1164 aa21.41■■□□□ 1.02
TRIM58-201ENST00000366481 KRT18P05783 430 aaKnown RBP21.4■■□□□ 1.02
TRIM58-201ENST00000366481 IFNAR2P48551 515 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 MRPL12P52815 198 aaKnown RBP21.4■■□□□ 1.02
TRIM58-201ENST00000366481 KCNMA1Q12791 1236 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 COASYQ13057 564 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 PRPF4BQ13523 1007 aaKnown RBP21.4■■□□□ 1.02
TRIM58-201ENST00000366481 HERC4Q5GLZ8 1057 aaPredicted RBP21.4■■□□□ 1.02
TRIM58-201ENST00000366481 LRRC55Q6ZSA7 311 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 SEPT12Q8IYM1 358 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 UHMK1Q8TAS1 419 aaKnown RBP21.4■■□□□ 1.02
TRIM58-201ENST00000366481 PAGR1Q9BTK6 254 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 DAPK3O43293 454 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 ATP6V1G2O95670 118 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 ACTN1P12814 892 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 HAS1Q92839 578 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 PANK4Q9NVE7 773 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 ENO4A6NNW6 628 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 ZFPM1Q8IX07 1006 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 RNF10Q8N5U6 811 aaKnown RBP21.4■■□□□ 1.02
TRIM58-201ENST00000366481 CUL5Q93034 780 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 PLCB1Q9NQ66 1216 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 PCDHA12Q9UN75 941 aa21.4■■□□□ 1.02
TRIM58-201ENST00000366481 KRIT1O00522 736 aa21.39■■□□□ 1.02
TRIM58-201ENST00000366481 HSPA9P38646 679 aaKnown RBP21.39■■□□□ 1.02
TRIM58-201ENST00000366481 CCNHP51946 323 aaPredicted RBP21.39■■□□□ 1.02
TRIM58-201ENST00000366481 MYOCDQ8IZQ8 938 aa21.39■■□□□ 1.02
TRIM58-201ENST00000366481 FAM133AQ8N9E0 248 aa21.39■■□□□ 1.02
TRIM58-201ENST00000366481 SWAP70Q9UH65 585 aa21.39■■□□□ 1.02
TRIM58-201ENST00000366481 STK38LQ9Y2H1 464 aa21.39■■□□□ 1.02
TRIM58-201ENST00000366481 KIAA1551Q9HCM1 1747 aa21.39■■□□□ 1.01
TRIM58-201ENST00000366481 ELF3P78545 371 aaPredicted RBP21.39■■□□□ 1.01
TRIM58-201ENST00000366481 NFIAQ12857 509 aa21.39■■□□□ 1.01
TRIM58-201ENST00000366481 BIRC3Q13489 604 aa21.39■■□□□ 1.01
TRIM58-201ENST00000366481 ADAT2Q7Z6V5 191 aaKnown RBP21.39■■□□□ 1.01
TRIM58-201ENST00000366481 ELAC2Q9BQ52 826 aaKnown RBP21.39■■□□□ 1.01
TRIM58-201ENST00000366481 IKZF4Q9H2S9 585 aa21.39■■□□□ 1.01
TRIM58-201ENST00000366481 KIF9Q9HAQ2 790 aa21.39■■□□□ 1.01
TRIM58-201ENST00000366481 SAMD15Q9P1V8 674 aa21.39■■□□□ 1.01
TRIM58-201ENST00000366481 AMACRQ9UHK6 382 aa21.39■■□□□ 1.01
TRIM58-201ENST00000366481 KLHL30Q0D2K2 578 aa21.38■■□□□ 1.01
TRIM58-201ENST00000366481 MREGQ8N565 214 aa21.38■■□□□ 1.01
TRIM58-201ENST00000366481 TBC1D16Q8TBP0 767 aa21.38■■□□□ 1.01
TRIM58-201ENST00000366481 BAP1Q92560 729 aa21.38■■□□□ 1.01
TRIM58-201ENST00000366481 RIOX1Q9H6W3 641 aa21.38■■□□□ 1.01
TRIM58-201ENST00000366481 GGA2Q9UJY4 613 aa21.38■■□□□ 1.01
TRIM58-201ENST00000366481 CD2APQ9Y5K6 639 aa21.38■■□□□ 1.01
TRIM58-201ENST00000366481 POTEFA5A3E0 1075 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms