RNA–Protein interactions for RNA: ENST00000364953.1

SNORD48-201, Transcript of small nucleolar RNA, C/D box 48, humanhuman

BASIC

Gene SNORD48, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD48-201ENST00000364953 REPS2Q8NFH8 660 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 TRIM58Q8NG06 486 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 TPCN2Q8NHX9 752 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 SNX29Q8TEQ0 813 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 TBC1D22AQ8WUA7 517 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 DCAF4Q8WV16 495 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 CLEC4DQ8WXI8 215 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 DDX1Q92499 740 aaKnown RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 SECISBP2LQ93073 1101 aaKnown RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 ARHGEF26Q96DR7 871 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 CALR3Q96L12 384 aaKnown RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 PRMT6Q96LA8 375 aaPredicted RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 TRIM47Q96LD4 638 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 RNPC3Q96LT9 517 aaKnown RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 CCDC17Q96LX7 622 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 FBXL18Q96ME1 805 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 FAM20AQ96MK3 541 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 NUP88Q99567 741 aaPredicted RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 REEP2Q9BRK0 252 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 HERPUD2Q9BSE4 406 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 ISCUQ9H1K1 167 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 RANBP17Q9H2T7 1088 aaKnown RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 GOLPH3Q9H4A6 298 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 ST6GALNAC4Q9H4F1 302 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 FAM204AQ9H8W3 233 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 TMBIM4Q9HC24 238 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 BRMS1Q9HCU9 246 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 AAASQ9NRG9 546 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 FAM207AQ9NSI2 230 aaPredicted RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 EMILIN3Q9NT22 766 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 USP40Q9NVE5 1235 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 PANK4Q9NVE7 773 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 ARGLU1Q9NWB6 273 aaPredicted RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 GRHL1Q9NZI5 618 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 STIM2Q9P246 746 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 RNF14Q9UBS8 474 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 DDX25Q9UHL0 483 aaKnown RBP1.93□□□□□ -2.1
SNORD48-201ENST00000364953 SERPINB13Q9UIV8 391 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 GGA2Q9UJY4 613 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 GGA1Q9UJY5 639 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 USP21Q9UK80 565 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 INTUQ9ULD6 942 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 PRR12Q9ULL5 1215 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 GUCA1BQ9UMX6 200 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 KIAA1024Q9UPX6 916 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 TMX2Q9Y320 296 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 COQ4Q9Y3A0 265 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 HYOU1Q9Y4L1 999 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 TAF1LQ8IZX4 1826 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 ADAMTSL1Q8N6G6 1762 aa1.93□□□□□ -2.1
SNORD48-201ENST00000364953 ATXN2Q99700 1313 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 UBR3Q6ZT12 1888 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 COL11A2P13942 1736 aaPredicted RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 FOCADQ5VW36 1801 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 ESYT3A0FGR9 886 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 MACROD2A1Z1Q3 448 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 POTEFA5A3E0 1075 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 ERICH4A6NGS2 130 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 FAM196BA6NMK8 535 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 ANKRD63C9JTQ0 380 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 F8VZ95 297 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 MYO1FO00160 1098 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 FOXN3O00409 490 aaPredicted RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 PPEF1O14829 653 aaPredicted RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 KIAA0391O15091 583 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 MAPK13O15264 365 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 EIF3DO15371 548 aaKnown RBP eCLIP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 SLC16A3O15427 465 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 SART1O43290 800 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 BUB1O43683 1085 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 KRT86O43790 486 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 NRDCO43847 1150 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 EVI5O60447 810 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 PPFIA2O75334 1257 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 PPFIA4O75335 1185 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 PALMO75781 387 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 RASSF9O75901 435 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 RGS20O76081 388 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 GFPT2O94808 682 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 GNA14O95837 355 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 KRT14P02533 472 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 C1QAP02745 245 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 AFPP02771 609 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 VIL1P09327 827 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 NUDT17P0C025 328 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 TMEM253P0C7T8 217 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 POTEIP0CG38 1075 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 ARP10275 920 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 MAPTP10636 758 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 BCRP11274 1271 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 UNGP13051 313 aaPredicted RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 IDEP14735 1019 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 NPR1P16066 1061 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 PLCG2P16885 1265 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 TRIM21P19474 475 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 MUTP22033 750 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 GUCY2CP25092 1073 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 CTNNA2P26232 953 aa1.92□□□□□ -2.1
SNORD48-201ENST00000364953 NMT1P30419 496 aaKnown RBP1.92□□□□□ -2.1
SNORD48-201ENST00000364953 INPP5BP32019 993 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms