RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 POLNQ7Z5Q5 900 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 SCUBE1Q8IWY4 988 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 PCDH19Q8TAB3 1148 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 PTPRN2Q92932 1015 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 IPO9Q96P70 1041 aaKnown RBP3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 KIAA1683Q9H0B3 1180 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 CSRNP2Q9H175 543 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 C12orf65Q9H3J6 166 aaKnown RBP3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 INCENPQ9NQS7 918 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 PFDN2Q9UHV9 154 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 FBXO10Q9UK96 956 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 PCDHA8Q9Y5H6 950 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 SLC30A1Q9Y6M5 507 aa3.81□□□□□ -1.8
RNU4-42P-201ENST00000364738 CCDC85CA6NKD9 419 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 ARVCFO00192 962 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 ARHGAP6O43182 974 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 STK10O94804 968 aaKnown RBP3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 AMY2AP04746 511 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 SRGAP2CP0DJJ0 459 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 PYGMP11217 842 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 AMY2BP19961 511 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 AOAHP28039 575 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 MC4RP32245 332 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 ST5P78524 1137 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 PTH1RQ03431 593 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 SSRP1Q08945 709 aaKnown RBP3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 ABHD18Q0P651 414 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 FHL2Q14192 279 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 NOLC1Q14978 699 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 MIIPQ5JXC2 388 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 OTOP2Q7RTS6 562 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 OSTM1Q86WC4 334 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 CKAP2LQ8IYA6 745 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 EXTL1Q92935 676 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 ZNF428Q96B54 188 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 FAM89AQ96GI7 184 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 PLA2G12BQ9BX93 195 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 ZDHHC5Q9C0B5 715 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 GALNT8Q9NY28 637 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 PUF60Q9UHX1 559 aaKnown RBP3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 CBLCQ9ULV8 474 aa3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 CCDC9Q9Y3X0 531 aaKnown RBP3.8□□□□□ -1.8
RNU4-42P-201ENST00000364738 CCDC66A2RUB6 948 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 MATN2O00339 956 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 KCNK3O14649 394 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 GSTA4O15217 222 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 PDPK1O15530 556 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 C6orf222P0C671 652 aaPredicted RBP3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 NAT1P18440 290 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 DNM2P50570 870 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 JAM2P57087 298 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 NFYCQ13952 458 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 RASGRF1Q13972 1273 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 CRY1Q16526 586 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 TBR1Q16650 682 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 FAM47CQ5HY64 1035 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 FAM209AQ5JX71 171 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 LARP4Q71RC2 724 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 CXXC5Q7LFL8 322 aaKnown RBP3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 ZC3H7AQ8IWR0 971 aaKnown RBP3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 WDR48Q8TAF3 677 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 ZNF503Q96F45 646 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 BTBD7Q9P203 1132 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 CDC42EP3Q9UKI2 254 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 MSRB2Q9Y3D2 182 aa3.79□□□□□ -1.8
RNU4-42P-201ENST00000364738 ZNF561-AS1K7EIQ3 104 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 DIAPH1O60610 1272 aaKnown RBP3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 C4BPAP04003 597 aaKnown RBP3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 MMEP08473 750 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 RPS19P39019 145 aaKnown RBP3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 MEOX1P50221 254 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 HERVK_113P62684 666 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 GABREP78334 506 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 DGCR2P98153 550 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 DUSP8Q13202 625 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 EIF4HQ15056 248 aaKnown RBP3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 STILQ15468 1287 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 FOXB2Q5VYV0 432 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 IGFL4Q6B9Z1 124 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 Q6ZSN1 163 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 C16orf59Q7L2K0 433 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 C1orf210Q8IVY1 113 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 RTKN2Q8IZC4 609 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 CISD2Q8N5K1 135 aaKnown RBP3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 ZBTB38Q8NAP3 1195 aaPredicted RBP3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 CFHR4Q92496 578 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 WNK4Q96J92 1243 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 BTBD2Q9BX70 525 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 SMURF1Q9HCE7 757 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 MSL2Q9HCI7 577 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 UCKL1Q9NWZ5 548 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 PCDHA9Q9Y5H5 950 aa3.78□□□□□ -1.8
RNU4-42P-201ENST00000364738 A0A0G2JNJ9 132 aa3.77□□□□□ -1.81
RNU4-42P-201ENST00000364738 CLASP2O75122 1294 aaKnown RBP3.77□□□□□ -1.81
RNU4-42P-201ENST00000364738 CRTAMO95727 393 aa3.77□□□□□ -1.81
RNU4-42P-201ENST00000364738 MPIG6BO95866 241 aa3.77□□□□□ -1.81
RNU4-42P-201ENST00000364738 ACRV1P26436 265 aa3.77□□□□□ -1.81
RNU4-42P-201ENST00000364738 MCM7P33993 719 aa3.77□□□□□ -1.81
RNU4-42P-201ENST00000364738 MSX2P35548 267 aaPredicted RBP3.77□□□□□ -1.81
RNU4-42P-201ENST00000364738 ECE1P42892 770 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms