RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 DCXO43602 365 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.34
GDPD3-201ENST00000360688 STAT5BP51692 787 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 NAPAP54920 295 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 ITGB3BPQ13352 177 aaPredicted RBP17.19■□□□□ 0.34
GDPD3-201ENST00000360688 CLUL1Q15846 466 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 APOA5Q6Q788 366 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 NPAS4Q8IUM7 802 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 CMTR2Q8IYT2 770 aaKnown RBP17.19■□□□□ 0.34
GDPD3-201ENST00000360688 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
GDPD3-201ENST00000360688 PGBD1Q96JS3 809 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 SDF4Q9BRK5 362 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 RIC8AQ9NPQ8 531 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 ANO2Q9NQ90 1003 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 IGSF9BQ9UPX0 1349 aa17.19■□□□□ 0.34
GDPD3-201ENST00000360688 CSPG5O95196 566 aa17.18■□□□□ 0.34
GDPD3-201ENST00000360688 FOSP01100 380 aaPredicted RBP17.18■□□□□ 0.34
GDPD3-201ENST00000360688 SMAD2Q15796 467 aaKnown RBP17.18■□□□□ 0.34
GDPD3-201ENST00000360688 FNDC1Q4ZHG4 1894 aaPredicted RBP17.18■□□□□ 0.34
GDPD3-201ENST00000360688 CEP55Q53EZ4 464 aa17.18■□□□□ 0.34
GDPD3-201ENST00000360688 SYNE3Q6ZMZ3 975 aa17.18■□□□□ 0.34
GDPD3-201ENST00000360688 ANO3Q9BYT9 981 aa17.18■□□□□ 0.34
GDPD3-201ENST00000360688 CELF4Q9BZC1 486 aaKnown RBP17.18■□□□□ 0.34
GDPD3-201ENST00000360688 IGFLR1Q9H665 355 aa17.18■□□□□ 0.34
GDPD3-201ENST00000360688 AGO4Q9HCK5 861 aaKnown RBP17.18■□□□□ 0.34
GDPD3-201ENST00000360688 PLXNA4Q9HCM2 1894 aa17.18■□□□□ 0.34
GDPD3-201ENST00000360688 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
GDPD3-201ENST00000360688 MYH9P35579 1960 aaKnown RBP17.17■□□□□ 0.34
GDPD3-201ENST00000360688 KDM3AQ9Y4C1 1321 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 SMIM35A0A1B0GVV1 85 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 MEIS1O00470 390 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 LINC01565O15544 149 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 MBTPS2O43462 519 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 TBX10O75333 385 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 ATG7O95352 703 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 ITGB1P05556 798 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 DNAJB1P25685 340 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 IRS1P35568 1242 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 FUT2Q10981 343 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 PAK2Q13177 524 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 ADAM15Q13444 863 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 NAALADL2Q58DX5 795 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 PPP1R18Q6NYC8 613 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 TEX2Q8IWB9 1127 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 SPPL3Q8TCT6 385 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 UIMC1Q96RL1 719 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
GDPD3-201ENST00000360688 IGKV6D-21A0A0A0MT36 114 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 STXBP3O00186 592 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 STAG3L1P0CL83 205 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 SCG2P13521 617 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 SLC26A2P50443 739 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 ADCY7P51828 1080 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 KRT76Q01546 638 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 RTN1Q16799 776 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 PAN2Q504Q3 1202 aaKnown RBP17.16■□□□□ 0.34
GDPD3-201ENST00000360688 MTHFD1LQ6UB35 978 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 NME8Q8N427 588 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 NEK1Q96PY6 1258 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 TMEM260Q9NX78 707 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
GDPD3-201ENST00000360688 V9GY48 417 aaPredicted RBP17.16■□□□□ 0.34
GDPD3-201ENST00000360688 ZNF318Q5VUA4 2279 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 SMCO2A6NFE2 343 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 hCG_1984214I3L0E3 225 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 ZBTB43O43298 467 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 CCNE2O96020 404 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 KLRC1P26715 233 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 SREBF1P36956 1147 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
GDPD3-201ENST00000360688 GATMP50440 423 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 EXOSC10Q01780 885 aaKnown RBP17.15■□□□□ 0.34
GDPD3-201ENST00000360688 SMAD4Q13485 552 aaKnown RBP17.15■□□□□ 0.34
GDPD3-201ENST00000360688 RNF20Q5VTR2 975 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 ZNF713Q8N859 430 aaPredicted RBP17.15■□□□□ 0.34
GDPD3-201ENST00000360688 KLHL23Q8NBE8 558 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 TCEANC2Q96MN5 208 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 UPF3BQ9BZI7 483 aaKnown RBP17.15■□□□□ 0.34
GDPD3-201ENST00000360688 CD207Q9UJ71 328 aa17.15■□□□□ 0.34
GDPD3-201ENST00000360688 WDR81Q562E7 1941 aa17.14■□□□□ 0.34
GDPD3-201ENST00000360688 HBP1O60381 514 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 MGEA5O60502 916 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 ABHD15Q6UXT9 468 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 ADGRD2Q7Z7M1 963 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 ATP8B4Q8TF62 1192 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 POP1Q99575 1024 aaKnown RBP17.14■□□□□ 0.33
GDPD3-201ENST00000360688 CDHR5Q9HBB8 845 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 BARHL2Q9NY43 387 aa17.14■□□□□ 0.33
GDPD3-201ENST00000360688 DDX39AO00148 427 aaKnown RBP17.13■□□□□ 0.33
GDPD3-201ENST00000360688 BACH1O14867 736 aa17.13■□□□□ 0.33
GDPD3-201ENST00000360688 ZNF76P36508 570 aa17.13■□□□□ 0.33
GDPD3-201ENST00000360688 SARSP49591 514 aaKnown RBP17.13■□□□□ 0.33
GDPD3-201ENST00000360688 NDUFV1P49821 464 aa17.13■□□□□ 0.33
GDPD3-201ENST00000360688 NFX1Q12986 1120 aaKnown RBP17.13■□□□□ 0.33
GDPD3-201ENST00000360688 FAM160B1Q5W0V3 765 aa17.13■□□□□ 0.33
GDPD3-201ENST00000360688 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms