RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TTC17Q96AE7 1141 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 ELAC2Q9BQ52 826 aaKnown RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 ADNPQ9H2P0 1102 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 GTSE1Q9NYZ3 720 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 TRAPPC8Q9Y2L5 1435 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 WDR17Q8IZU2 1322 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 ECM2O94769 699 aaPredicted RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 PARD6BQ9BYG5 372 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 BABAM1Q9NWV8 329 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 LRRN2O75325 713 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 DDAH1O94760 285 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 PCP11498 1178 aaKnown RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 CTDSPL2Q05D32 466 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 HIC1Q14526 733 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 CNBD2Q96M20 576 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 ZMYND10O75800 440 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 TOMM70O94826 608 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 POLR2MP0CAP2 368 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 METTL23Q86XA0 190 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 PLBD2Q8NHP8 589 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 GOLGA8TH3BQL2 631 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 GOLGA8HP0CJ92 632 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 KLC1Q07866 573 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 INPP5AQ14642 412 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 ST13P5Q8NFI4 369 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 TEKT4Q8WW24 435 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 SELENONQ9NZV5 590 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 APLFQ8IW19 511 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 TDRD7Q8NHU6 1098 aaKnown RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 TTC8Q8TAM2 541 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 GJA10Q969M2 543 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 TMEM206Q9H813 350 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 HACD3Q9P035 362 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 NFKBIL1Q9UBC1 381 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 TRAF3IP3Q9Y228 551 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 PRDM1O75626 825 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 PNMA6AP0CW24 399 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 PSMA3P25788 255 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 ABI1Q8IZP0 508 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 ANXA13P27216 316 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 KDM5DQ9BY66 1539 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 CDC37Q16543 378 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 CDR2LQ86X02 465 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 SIX6OS1Q8N1H7 587 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 GINM1Q9NU53 330 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 KIF24Q5T7B8 1368 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 CARMIL3Q8ND23 1372 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 CXCR5P32302 372 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 ALCAMQ13740 583 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 SLC30A9Q6PML9 568 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 FANCAO15360 1455 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 SLC39A6Q13433 755 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 LSG1Q9H089 658 aaKnown RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 BIVM-ERCC5R4GMW8 1640 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 ZNF189O75820 626 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 ARL4CP56559 192 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 NFU1Q9UMS0 254 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 PLAAQ9Y263 795 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 ADCY3O60266 1144 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 IL2RBP14784 551 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 TADA1Q96BN2 335 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 PANX2Q96RD6 677 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 ZNF556Q9HAH1 456 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 GPBP1L1Q9HC44 474 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 EPHB1P54762 984 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 PPARAQ07869 468 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 RRM2BQ7LG56 351 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 TBC1D4O60343 1298 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 PFKFB2O60825 505 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 TCF3P15923 654 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 RINLQ6ZS11 566 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 RBM41Q96IZ5 413 aaKnown RBP9.94□□□□□ -0.82
VPS13A-203ENST00000360280 KLC4Q9NSK0 619 aa9.94□□□□□ -0.82
VPS13A-203ENST00000360280 HAUS5O94927 633 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 FAM47CQ5HY64 1035 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 ARMCX2Q7L311 632 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 CNGB3Q9NQW8 809 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 NSMCE4AQ9NXX6 385 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 FAM170AA1A519 330 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 NDUFA10O95299 355 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 HSPA2P54652 639 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 hCG_2014768A0A024R1R8 64 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 A0A1W2PQ27 194 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 A0A1W2PQ64 194 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 A0A1W2PQD8 194 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 PABPC4Q13310 644 aaKnown RBP eCLIP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 TCIRG1Q13488 830 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 RASSF3Q86WH2 238 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 TEX2Q8IWB9 1127 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 SUPT20HQ8NEM7 779 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 RUBCNLQ9H714 662 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 GOLGA8IPA6NC78 632 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 GSPT1P15170 499 aaKnown RBP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 CYLC2Q14093 348 aaPredicted RBP9.93□□□□□ -0.82
VPS13A-203ENST00000360280 ACSBG1Q96GR2 724 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 EDEM3Q9BZQ6 932 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 UBE4BO95155 1302 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 TMEM191CA6NGB0 347 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 MYO1DO94832 1006 aa9.93□□□□□ -0.82
VPS13A-203ENST00000360280 CLCN6P51797 869 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms