RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 DPH5Q9H2P9 285 aa22.69■■□□□ 1.22
TRIM3-202ENST00000359518 NOC2LQ9Y3T9 749 aaKnown RBP22.69■■□□□ 1.22
TRIM3-202ENST00000359518 AFPP02771 609 aaKnown RBP22.68■■□□□ 1.22
TRIM3-202ENST00000359518 TMOD1P28289 359 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 ECHS1P30084 290 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 MDH1P40925 334 aaKnown RBP22.68■■□□□ 1.22
TRIM3-202ENST00000359518 SLC12A3P55017 1021 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 ODF2Q5BJF6 829 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 MMS22LQ6ZRQ5 1243 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 TBC1D16Q8TBP0 767 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 U2AF1L4Q8WU68 220 aaKnown RBP22.68■■□□□ 1.22
TRIM3-202ENST00000359518 ANO3Q9BYT9 981 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 USP40Q9NVE5 1235 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 CDK5RAP2Q96SN8 1893 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 CACNB3P54284 484 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 IFT88Q13099 833 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 UAP1Q16222 522 aaPredicted RBP22.68■■□□□ 1.22
TRIM3-202ENST00000359518 USH1GQ495M9 461 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 B4GALNT4Q76KP1 1039 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 SLF2Q8IX21 1173 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 P2RX7Q99572 595 aaKnown RBP22.68■■□□□ 1.22
TRIM3-202ENST00000359518 GFPT2O94808 682 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 ATP2B4P23634 1241 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 HNRNPH1P31943 449 aaKnown RBP22.68■■□□□ 1.22
TRIM3-202ENST00000359518 DAAM2Q86T65 1068 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 NLRP14Q86W24 1093 aa22.68■■□□□ 1.22
TRIM3-202ENST00000359518 EP400Q96L91 3159 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 GAKO14976 1311 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 SHMT1P34896 483 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 COPB2P35606 906 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 MARSP56192 900 aaKnown RBP22.67■■□□□ 1.22
TRIM3-202ENST00000359518 ITGB3BPQ13352 177 aaPredicted RBP22.67■■□□□ 1.22
TRIM3-202ENST00000359518 GIT2Q14161 759 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 MREGQ8N565 214 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 ISCUQ9H1K1 167 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 FBXL5Q9UKA1 691 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 SRCAPQ6ZRS2 3230 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 GCOM1H8Y6P7 765 aaPredicted RBP22.67■■□□□ 1.22
TRIM3-202ENST00000359518 MYZAPP0CAP1 466 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 GCFC2P16383 781 aaKnown RBP22.67■■□□□ 1.22
TRIM3-202ENST00000359518 HSPA9P38646 679 aaKnown RBP22.67■■□□□ 1.22
TRIM3-202ENST00000359518 SF3A3Q12874 501 aaKnown RBP eCLIP22.67■■□□□ 1.22
TRIM3-202ENST00000359518 PRPF4BQ13523 1007 aaKnown RBP22.67■■□□□ 1.22
TRIM3-202ENST00000359518 KNOP1Q1ED39 458 aaKnown RBP22.67■■□□□ 1.22
TRIM3-202ENST00000359518 MYCBPAPQ8TBZ2 947 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 C8orf37Q96NL8 207 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 TMEM59LQ9UK28 342 aa22.67■■□□□ 1.22
TRIM3-202ENST00000359518 TTI1O43156 1089 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 ABCB4P21439 1286 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 MNAT1P51948 309 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 TCP10Q12799 353 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 ARHGAP27Q6ZUM4 889 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 ZFPM1Q8IX07 1006 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 LRRC57Q8N9N7 239 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 TPCN2Q8NHX9 752 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 FAM163AQ96GL9 167 aaPredicted RBP22.66■■□□□ 1.22
TRIM3-202ENST00000359518 LRRC4CQ9HCJ2 640 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 GCNT4Q9P109 453 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 IGKV6D-41A0A0C4DH26 115 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 PGRMC1O00264 195 aaKnown RBP22.66■■□□□ 1.22
TRIM3-202ENST00000359518 MEFVO15553 781 aaPredicted RBP22.66■■□□□ 1.22
TRIM3-202ENST00000359518 GCNT3O95395 438 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 NFIAQ12857 509 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 HYIQ5T013 277 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 KCNV1Q6PIU1 500 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 KSR1Q8IVT5 923 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 SCFD2Q8WU76 684 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 BHMT2Q9H2M3 363 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 OSGEPQ9NPF4 335 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 ATF5Q9Y2D1 282 aaPredicted RBP22.66■■□□□ 1.22
TRIM3-202ENST00000359518 DPY19L2P1Q6NXN4 242 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 CYP2W1Q8TAV3 490 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 TMBIM4Q9HC24 238 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 DNM3Q9UQ16 869 aa22.66■■□□□ 1.22
TRIM3-202ENST00000359518 DCDC2CA8MYV0 355 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 POLD1P28340 1107 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 EDRF1Q3B7T1 1238 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 KCNMB3Q9NPA1 279 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 BCS1LQ9Y276 419 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 NR2E1Q9Y466 385 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 HMGB1P1B2RPK0 211 aaPredicted RBP22.65■■□□□ 1.22
TRIM3-202ENST00000359518 H2AFZP0C0S5 128 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 IKQ13123 557 aaPredicted RBP22.65■■□□□ 1.22
TRIM3-202ENST00000359518 DOK7Q18PE1 504 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 H2AFVQ71UI9 128 aa22.65■■□□□ 1.22
TRIM3-202ENST00000359518 FLOT1O75955 427 aa22.64■■□□□ 1.22
TRIM3-202ENST00000359518 ZNF844Q08AG5 666 aa22.64■■□□□ 1.22
TRIM3-202ENST00000359518 PPP1R18Q6NYC8 613 aa22.64■■□□□ 1.22
TRIM3-202ENST00000359518 FOXR2Q6PJQ5 311 aa22.64■■□□□ 1.22
TRIM3-202ENST00000359518 CD302Q8IX05 232 aa22.64■■□□□ 1.22
TRIM3-202ENST00000359518 CERS5Q8N5B7 392 aa22.64■■□□□ 1.22
TRIM3-202ENST00000359518 RGL1Q9NZL6 768 aa22.64■■□□□ 1.22
TRIM3-202ENST00000359518 DDX3XO00571 662 aaKnown RBP eCLIP22.64■■□□□ 1.21
TRIM3-202ENST00000359518 NR3C1P04150 777 aa22.64■■□□□ 1.21
TRIM3-202ENST00000359518 ARHGAP4P98171 946 aa22.64■■□□□ 1.21
TRIM3-202ENST00000359518 GPATCH4Q5T3I0 446 aaKnown RBP22.64■■□□□ 1.21
TRIM3-202ENST00000359518 PIGOQ8TEQ8 1089 aa22.64■■□□□ 1.21
TRIM3-202ENST00000359518 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.64■■□□□ 1.21
TRIM3-202ENST00000359518 SEPT11Q9NVA2 429 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms