RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 OSBP2Q969R2 916 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 NUDT16Q96DE0 195 aaKnown RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 PGM2Q96G03 612 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 HAPLN3Q96S86 360 aa12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 FOXP1Q9H334 677 aaPredicted RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 DENND2DQ9H6A0 471 aaPredicted RBP12.36□□□□□ -0.43
SEPSECS-201ENST00000358971 RIMS1Q86UR5 1692 aaKnown RBP12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 KRIT1O00522 736 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 PJA2O43164 708 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 ITGA6P23229 1130 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 RTP1P59025 263 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 RPS6KA1Q15418 735 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 CNGA2Q16280 664 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 ATP11CQ8NB49 1132 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 FBXO41Q8TF61 875 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 UTP11Q9Y3A2 253 aaKnown RBP12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 A0A0J9YVX5 310 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 PSMA7O14818 248 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 TTI1O43156 1089 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 LMNAP02545 664 aaKnown RBP12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 ADCY1Q08828 1119 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 NTRK3Q16288 839 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 WASHC2DQ5SRD0 308 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 PTF1AQ7RTS3 328 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 RIC3Q7Z5B4 369 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 SPATA24Q86W54 205 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 NEK9Q8TD19 979 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 MPP4Q96JB8 637 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 SIKE1Q9BRV8 207 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 OXCT2Q9BYC2 517 aaPredicted RBP12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 CELF4Q9BZC1 486 aaKnown RBP12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 LRMDAQ9H2I8 198 aa12.35□□□□□ -0.43
SEPSECS-201ENST00000358971 A6NJR5 290 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 LYNP07948 512 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 EIF4A1P60842 406 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 RCN1Q15293 331 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 MEI1Q5TIA1 1274 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 HS2ST1Q7LGA3 356 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 STKLD1Q8NE28 680 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 GDAP1Q8TB36 358 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 NMD3Q96D46 503 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 ERP27Q96DN0 273 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 CATSPER2Q96P56 530 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 ARHGEF38Q9NXL2 777 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 FAM205CA6NFA0 338 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 KCNQ3O43525 872 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 OXCT1P55809 520 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 DUS1LQ6P1R4 473 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 NANOGNBQ7Z5D8 188 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 SCUBE1Q8IWY4 988 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 KCNK9Q9NPC2 374 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 DBR1Q9UK59 544 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 CPDO75976 1380 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 AGTP01019 485 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 ADARP55265 1226 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 PROSER3Q2NL68 480 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 C6orf118Q5T5N4 469 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 OTUD6AQ7L8S5 288 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 ADSSL1Q8N142 457 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 RIBC1Q8N443 379 aaPredicted RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 DTX3LQ8TDB6 740 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 ARHGEF2Q92974 986 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 CNOT6LQ96LI5 555 aaKnown RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 NAP1L3Q99457 506 aaPredicted RBP12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 NACA2Q9H009 215 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 HSFX1Q9UBD0 423 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 ZNF180Q9UJW8 692 aa12.34□□□□□ -0.43
SEPSECS-201ENST00000358971 A0A1W2PQJ5 194 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 SIGLEC16A6NMB1 481 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 MAP3K7O43318 606 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 ATP5HO75947 161 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 KLRC1P26715 233 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 OCRLQ01968 901 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 ZNF174Q15697 407 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 KHDC1Q4VXA5 237 aaKnown RBP12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 FAM133AQ8N9E0 248 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 MYLK2Q9H1R3 596 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 LUC7LQ9NQ29 371 aaKnown RBP12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 TMEM59LQ9UK28 342 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 WASLO00401 505 aaPredicted RBP12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 CAPN9O14815 690 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 RAD21O60216 631 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 LCA5LO95447 670 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 VCAM1P19320 739 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 YY1P25490 414 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 PMS2P54278 862 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 HPCAP84074 193 aa12.33□□□□□ -0.44
SEPSECS-201ENST00000358971 FKBP4Q02790 459 aaKnown RBP eCLIP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms