RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PNMA5Q96PV4 448 aa16.65■□□□□ 0.26
CCNE1-202ENST00000357943 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
CCNE1-202ENST00000357943 KIAA1024Q9UPX6 916 aa16.65■□□□□ 0.26
CCNE1-202ENST00000357943 A0A087X0B3 334 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 A0A1B0GVL5 298 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 HAS3O00219 553 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 PRPF40AO75400 957 aaKnown RBP16.64■□□□□ 0.25
CCNE1-202ENST00000357943 STBD1O95210 358 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 CMA1P23946 247 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 PSEN2P49810 448 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 SLC26A2P50443 739 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 MFSD10Q14728 455 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 HYIQ5T013 277 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 LRRC15Q8TF66 581 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 GLT1D1Q96MS3 346 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 KATNAL1Q9BW62 490 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 PANK2Q9BZ23 570 aa16.64■□□□□ 0.25
CCNE1-202ENST00000357943 DDX19AQ9NUU7 478 aaKnown RBP16.64■□□□□ 0.25
CCNE1-202ENST00000357943 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 GOLGA6L4A6NEF3 574 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 OATP04181 439 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 YWHABP31946 246 aaKnown RBP16.63■□□□□ 0.25
CCNE1-202ENST00000357943 TXLNAP40222 546 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 ANO5Q75V66 913 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 ANKLE1Q8NAG6 615 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 RASSF8Q8NHQ8 419 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 ATP8B4Q8TF62 1192 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 VTI1AQ96AJ9 217 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 CALML4Q96GE6 196 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 CDK5RAP3Q96JB5 506 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 SH2D3AQ9BRG2 576 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 SENP6Q9GZR1 1112 aaPredicted RBP16.63■□□□□ 0.25
CCNE1-202ENST00000357943 TRPC6Q9Y210 931 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 GRIN2DO15399 1336 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 KDM3AQ9Y4C1 1321 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 DKC1O60832 514 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCNE1-202ENST00000357943 CABYRO75952 493 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 LYPLA2O95372 231 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 PFKFB1P16118 471 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 PLCG1P19174 1290 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 MUTP22033 750 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 NBPF20Q3BBV1 942 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 XKR3Q5GH77 459 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 PDILTQ8N807 584 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 GOLPH3LQ9H4A5 285 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 STARD7Q9NQZ5 370 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
CCNE1-202ENST00000357943 SEPT9Q9UHD8 586 aaPredicted RBP16.63■□□□□ 0.25
CCNE1-202ENST00000357943 DDX11L8A8MPP1 907 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 E9PMD0 336 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 ITGA7Q13683 1181 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 PLA2G4FQ68DD2 849 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 FSIP1Q8NA03 581 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 BBXQ8WY36 941 aaPredicted RBP16.62■□□□□ 0.25
CCNE1-202ENST00000357943 MRPS27Q92552 414 aaKnown RBP16.62■□□□□ 0.25
CCNE1-202ENST00000357943 PAWRQ96IZ0 340 aaKnown RBP16.62■□□□□ 0.25
CCNE1-202ENST00000357943 NACC1Q96RE7 527 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 NT5C3AQ9H0P0 336 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 CCDC39Q9UFE4 941 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 HPSEQ9Y251 543 aa16.62■□□□□ 0.25
CCNE1-202ENST00000357943 POLR2DO15514 142 aaKnown RBP16.61■□□□□ 0.25
CCNE1-202ENST00000357943 HBP1O60381 514 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 SMIM10L2AP0DMW4 78 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 SMIM10L2BP0DMW5 78 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 COL6A1P12109 1028 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 INSRRP14616 1297 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 NDUFA8P51970 172 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 NPEPPSP55786 919 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 HIC1Q14526 733 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 NAALADL2Q58DX5 795 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 FAM167AQ96KS9 214 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 NRBP2Q9NSY0 501 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 KCNH3Q9ULD8 1083 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 DNM3Q9UQ16 869 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 SCN10AQ9Y5Y9 1956 aa16.61■□□□□ 0.25
CCNE1-202ENST00000357943 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 CCDC85CA6NKD9 419 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 ZBTB42B2RXF5 422 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 SLC26A4O43511 780 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 CAPN2P17655 700 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 SOX10P56693 466 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 UBE2HP62256 183 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 IGBP1P78318 339 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 PPFIA1Q13136 1202 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 MTERF2Q49AM1 385 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 RRAGBQ5VZM2 374 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 C7orf31Q8N865 590 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 TRAPPC12Q8WVT3 735 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 NIFKQ9BYG3 293 aaKnown RBP16.6■□□□□ 0.25
CCNE1-202ENST00000357943 BLOC1S4Q9NUP1 217 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 SETD4Q9NVD3 440 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms