RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 E2F4Q16254 413 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 PLPPR4Q7Z2D5 763 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 ENGASEQ8NFI3 743 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 GPT2Q8TD30 523 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 ATP6V0A1Q93050 837 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 CDK5RAP3Q96JB5 506 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 RNPEPQ9H4A4 650 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 SMARCAD1Q9H4L7 1026 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 BLOC1S4Q9NUP1 217 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 STK24Q9Y6E0 443 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 KDM3AQ9Y4C1 1321 aa28.41■■■□□ 2.14
SSBP3-202ENST00000357475 NR1I2O75469 434 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 F2P00734 622 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 ASGR1P07306 291 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 BRDTQ58F21 947 aaPredicted RBP28.4■■■□□ 2.14
SSBP3-202ENST00000357475 PLA2G4FQ68DD2 849 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 RNF180Q86T96 592 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 C4orf19Q8IY42 314 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 FMR1NBQ8N0W7 255 aaPredicted RBP28.4■■■□□ 2.14
SSBP3-202ENST00000357475 CCDC39Q9UFE4 941 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 OGDHLQ9ULD0 1010 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 SCN10AQ9Y5Y9 1956 aa28.4■■■□□ 2.14
SSBP3-202ENST00000357475 H3BRB1 525 aa28.39■■■□□ 2.14
SSBP3-202ENST00000357475 SYKP43405 635 aa28.39■■■□□ 2.14
SSBP3-202ENST00000357475 CHMP4BP1P59074 171 aa28.39■■■□□ 2.14
SSBP3-202ENST00000357475 PLCB4Q15147 1175 aa28.39■■■□□ 2.14
SSBP3-202ENST00000357475 RRAGBQ5VZM2 374 aa28.39■■■□□ 2.14
SSBP3-202ENST00000357475 ANO5Q75V66 913 aa28.39■■■□□ 2.14
SSBP3-202ENST00000357475 CKAP2LQ8IYA6 745 aa28.39■■■□□ 2.14
SSBP3-202ENST00000357475 U2AF1L4Q8WU68 220 aaKnown RBP28.39■■■□□ 2.14
SSBP3-202ENST00000357475 CRISPLD2Q9H0B8 497 aa28.39■■■□□ 2.14
SSBP3-202ENST00000357475 TUT1Q9H6E5 874 aaKnown RBP28.39■■■□□ 2.14
SSBP3-202ENST00000357475 GJB1P08034 283 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 NFKBIBQ15653 356 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 LONRF3Q496Y0 759 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 COL13A1Q5TAT6 717 aaPredicted RBP28.38■■■□□ 2.13
SSBP3-202ENST00000357475 LYPLA2O95372 231 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 SGPL1O95470 568 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 OATP04181 439 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 YWHABP31946 246 aaKnown RBP28.38■■■□□ 2.13
SSBP3-202ENST00000357475 STAT6P42226 847 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 CCDC73Q6ZRK6 1079 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 ERAP1Q9NZ08 941 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 SERTAD1Q9UHV2 236 aa28.38■■■□□ 2.13
SSBP3-202ENST00000357475 DDX11L8A8MPP1 907 aa28.37■■■□□ 2.13
SSBP3-202ENST00000357475 ACLYP53396 1101 aa28.37■■■□□ 2.13
SSBP3-202ENST00000357475 NPEPPSP55786 919 aa28.37■■■□□ 2.13
SSBP3-202ENST00000357475 FAM160A1Q05DH4 1040 aa28.37■■■□□ 2.13
SSBP3-202ENST00000357475 NT5C3AQ9H0P0 336 aa28.37■■■□□ 2.13
SSBP3-202ENST00000357475 SEPT9Q9UHD8 586 aaPredicted RBP28.37■■■□□ 2.13
SSBP3-202ENST00000357475 LOXHD1Q8IVV2 1947 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 SLC26A4O43511 780 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 ACTN4O43707 911 aaKnown RBP28.36■■■□□ 2.13
SSBP3-202ENST00000357475 ZEB2O60315 1214 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 ZNF202O95125 648 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 MUTP22033 750 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 PSEN2P49810 448 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 MNX1P50219 401 aaPredicted RBP28.36■■■□□ 2.13
SSBP3-202ENST00000357475 MCM6Q14566 821 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 MFSD10Q14728 455 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 KIAA0753Q2KHM9 967 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 PCSK9Q8NBP7 692 aaKnown RBP28.36■■■□□ 2.13
SSBP3-202ENST00000357475 RAD54LQ92698 747 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 NACC1Q96RE7 527 aa28.36■■■□□ 2.13
SSBP3-202ENST00000357475 MTG1Q9BT17 334 aaPredicted RBP28.36■■■□□ 2.13
SSBP3-202ENST00000357475 KIAA0100Q14667 2235 aaKnown RBP28.36■■■□□ 2.13
SSBP3-202ENST00000357475 HAS3O00219 553 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 DHX8Q14562 1220 aaKnown RBP28.35■■■□□ 2.13
SSBP3-202ENST00000357475 ARRDC4Q8NCT1 418 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 ATP8B4Q8TF62 1192 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 STAMQ92783 540 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 MTRQ99707 1265 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 BHMT2Q9H2M3 363 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 DACT1Q9NYF0 836 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 ZNF215Q9UL58 517 aaPredicted RBP28.35■■■□□ 2.13
SSBP3-202ENST00000357475 DNM3Q9UQ16 869 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 TRPC6Q9Y210 931 aa28.35■■■□□ 2.13
SSBP3-202ENST00000357475 ZBTB42B2RXF5 422 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 KPNA6O60684 536 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 TFRCP02786 760 aaKnown RBP28.34■■■□□ 2.13
SSBP3-202ENST00000357475 GJA8P48165 433 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 XKR3Q5GH77 459 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 GRAMD1CQ8IYS0 662 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 IQUBQ8NA54 791 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 TRAPPC12Q8WVT3 735 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 ZBTB10Q96DT7 871 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 GRIN2DO15399 1336 aa28.34■■■□□ 2.13
SSBP3-202ENST00000357475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.33■■■□□ 2.13
SSBP3-202ENST00000357475 DNM1LO00429 736 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 PLA2G4BP0C869 781 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 RARRES1P49788 294 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 SLC26A2P50443 739 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 HIC1Q14526 733 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 TRIP12Q14669 1992 aaPredicted RBP28.33■■■□□ 2.13
SSBP3-202ENST00000357475 KAT6AQ92794 2004 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 DKC1O60832 514 aaKnown RBP eCLIP28.33■■■□□ 2.13
SSBP3-202ENST00000357475 EYA4O95677 639 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 SLC12A3P55017 1021 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 MTERF2Q49AM1 385 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 BBXQ8WY36 941 aaPredicted RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms