RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 BEND6Q5SZJ8 279 aaPredicted RBP13.77□□□□□ -0.2
SMC4-202ENST00000357388 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 EPM2AIP1Q7L775 607 aaPredicted RBP13.77□□□□□ -0.2
SMC4-202ENST00000357388 RYBPQ8N488 228 aaPredicted RBP13.77□□□□□ -0.2
SMC4-202ENST00000357388 SEPT3Q9UH03 358 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 MAN1B1Q9UKM7 699 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 TMED10P49755 219 aaKnown RBP13.77□□□□□ -0.21
SMC4-202ENST00000357388 MED21Q13503 144 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 CYLC2Q14093 348 aaPredicted RBP13.77□□□□□ -0.21
SMC4-202ENST00000357388 KIF19Q2TAC6 998 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 DNAJC24Q6P3W2 148 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 ATP11BQ9Y2G3 1177 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 DLATP10515 647 aaKnown RBP13.77□□□□□ -0.21
SMC4-202ENST00000357388 PTGDRQ13258 359 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 DPCR1Q3MIW9 517 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 ARHGEF25Q86VW2 580 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 ZNF212Q9UDV6 495 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 STRIP2Q9ULQ0 834 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.77□□□□□ -0.215e-7■■■■□ 23.7
SMC4-202ENST00000357388 CHL1O00533 1208 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 PAMP19021 973 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.213e-49■■■■■ 252.4
SMC4-202ENST00000357388 THAP11Q96EK4 314 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 ACCSQ96QU6 501 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 RCOR1Q9UKL0 485 aa13.77□□□□□ -0.21
SMC4-202ENST00000357388 C16orf96A6NNT2 1141 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 TTC13Q8NBP0 860 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 NCLNQ969V3 563 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 MFAP3LO75121 409 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 CCNE1P24864 410 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 DAB2P98082 770 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 POLA2Q14181 598 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 MORF4L2Q15014 288 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 SCG3Q8WXD2 468 aaKnown RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 CFAP36Q96G28 342 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 CLIC6Q96NY7 704 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 FAM167BQ9BTA0 163 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 NEUROG2Q9H2A3 272 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 DISC1Q9NRI5 854 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 STMN3Q9NZ72 180 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 AKT3Q9Y243 479 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 TRAPPC8Q9Y2L5 1435 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 GOLGA8MH3BSY2 632 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 GCFC2P16383 781 aaKnown RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 ELF1P32519 619 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 ARFIP2P53365 341 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 DEFA1P59665 94 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 DEFA3P59666 94 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 YWHAHQ04917 246 aaPredicted RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 ZBTB41Q5SVQ8 909 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 MIS18BP1Q6P0N0 1132 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 MYLK4Q86YV6 388 aaPredicted RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.211e-8■■■■■ 268.2
SMC4-202ENST00000357388 COG4Q9H9E3 785 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 LEMD3Q9Y2U8 911 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 RASA4BC9J798 803 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 RASA4O43374 803 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 DNAJC6O75061 913 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 GGCXP38435 758 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 ACTN3Q08043 901 aaPredicted RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 BBS9Q3SYG4 887 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 IFNL3Q8IZI9 196 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 TAB3Q8N5C8 712 aaPredicted RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 ZNF496Q96IT1 587 aaPredicted RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 ATP6V1G3Q96LB4 118 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 ASPSCR1Q9BZE9 553 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 KLC2Q9H0B6 622 aa13.76□□□□□ -0.21
SMC4-202ENST00000357388 DNAJC17Q9NVM6 304 aaKnown RBP13.76□□□□□ -0.21
SMC4-202ENST00000357388 TARSL2A2RTX5 802 aaKnown RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 WDR91A4D1P6 747 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 PDIA3P30101 505 aaKnown RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 PAPOLAP51003 745 aaKnown RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 ALCAMQ13740 583 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 KSR1Q8IVT5 923 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 TTLL11Q8NHH1 800 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 UIMC1Q96RL1 719 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 ORAI2Q96SN7 254 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 GINM1Q9NU53 330 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 PKD2L2Q9NZM6 624 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 WDR64B1ANS9 1081 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 ZNF189O75820 626 aaPredicted RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 GRIN1Q05586 938 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 SLC12A1Q13621 1099 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 DDX42Q86XP3 938 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMC4-202ENST00000357388 NDUFAF2Q8N183 169 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 KCTD6Q8NC69 237 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 HINFPQ9BQA5 517 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 ETNK1Q9HBU6 452 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 TSC22D4Q9Y3Q8 395 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 FRMPD2Q68DX3 1309 aaPredicted RBP13.75□□□□□ -0.21
SMC4-202ENST00000357388 TJP3O95049 919 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 LRRC63Q05C16 580 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 KLC1Q07866 573 aa13.75□□□□□ -0.21
SMC4-202ENST00000357388 CUL4AQ13619 759 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms