RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SAMSN1Q9NSI8 373 aaKnown RBP15.98■□□□□ 0.15
LMX1B-201ENST00000355497 APOBEC2Q9Y235 224 aaKnown RBP15.98■□□□□ 0.15
LMX1B-201ENST00000355497 PER1O15534 1290 aaPredicted RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 ARHGEF9O43307 516 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 TJP3O95049 919 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 NSUN2Q08J23 767 aaKnown RBP eCLIP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 KIAA1841Q6NSI8 718 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 SCARA5Q6ZMJ2 495 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 NDUFAF2Q8N183 169 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 FAM96AQ9H5X1 160 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 SAYSD1Q9NPB0 183 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 PPARGC1AQ9UBK2 798 aaKnown RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 PTPRKQ15262 1439 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 GYG2O15488 501 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 PHKA1P46020 1223 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 EMBQ6PCB8 327 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 ACAD11Q709F0 780 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 TTC17Q96AE7 1141 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 NFU1Q9UMS0 254 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 INPP5FQ9Y2H2 1132 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 ASXL2Q76L83 1435 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 GTPBP10A4D1E9 387 aaKnown RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 PSAPP07602 524 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 MMEP08473 750 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 PSMA2P25787 234 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 Q3C1V9 767 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 RHOT2Q8IXI1 618 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 NEUROG2Q9H2A3 272 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 MRPL40Q9NQ50 206 aaKnown RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 WARS2Q9UGM6 360 aaKnown RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 SNX5Q9Y5X3 404 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 ATP5HO75947 161 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 PLA2G4BP0C869 781 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 DRP2Q13474 957 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 TEDDM1Q5T9Z0 273 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 FLAD1Q8NFF5 587 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 PODXLO00592 558 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 SNX2O60749 519 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 NFKBIAP25963 317 aa15.97■□□□□ 0.15
LMX1B-201ENST00000355497 GNL1P36915 607 aaPredicted RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 RPF1Q9H9Y2 349 aaKnown RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 DNAJC17Q9NVM6 304 aaKnown RBP15.97■□□□□ 0.15
LMX1B-201ENST00000355497 XDHP47989 1333 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 ARL4CP56559 192 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 CAPRIN1Q14444 709 aaKnown RBP15.96■□□□□ 0.15
LMX1B-201ENST00000355497 ADCK5Q3MIX3 580 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 MTERF2Q49AM1 385 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 ERICH1Q86X53 443 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 ING2Q9H160 280 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 E9PMD0 336 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 ESRRBO95718 433 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 ZNF18P17022 549 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 KPNA7A9QM74 516 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 OSTNP61366 133 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 PAGE5Q96GU1 130 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 GCNAQ96QF7 691 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 NDST4Q9H3R1 872 aa15.96■□□□□ 0.15
LMX1B-201ENST00000355497 CTIFO43310 598 aaKnown RBP15.96■□□□□ 0.14
LMX1B-201ENST00000355497 ANP32DO95626 131 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 FGGP02679 453 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 MB21D1Q8N884 522 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 DYDC2Q96IM9 177 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 GREM2Q9H772 168 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 COG4Q9H9E3 785 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 GPR108Q9NPR9 543 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 ZFP69BQ9UJL9 534 aa15.96■□□□□ 0.14
LMX1B-201ENST00000355497 PPEF1O14829 653 aaPredicted RBP15.95■□□□□ 0.14
LMX1B-201ENST00000355497 CREB3O43889 395 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 ADORA1P30542 326 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 SLC16A2P36021 539 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 ZC3H12BQ5HYM0 836 aaKnown RBP15.95■□□□□ 0.14
LMX1B-201ENST00000355497 PDXDC1Q6P996 788 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 GAS2L3Q86XJ1 694 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 PDE8BO95263 885 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 CIITAP33076 1130 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 CDO1Q16878 200 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 SYDE2Q5VT97 1194 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 RWDD4Q6NW29 188 aaKnown RBP15.95■□□□□ 0.14
LMX1B-201ENST00000355497 CCDC188H7C350 402 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 LRRC63Q05C16 580 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 SCG3Q8WXD2 468 aaKnown RBP15.95■□□□□ 0.14
LMX1B-201ENST00000355497 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 PLEKHG3A1L390 1219 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 PHKG2P15735 406 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 PLCG1P19174 1290 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 MSTO1Q9BUK6 570 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 SRPRBQ9Y5M8 271 aaKnown RBP15.95■□□□□ 0.14
LMX1B-201ENST00000355497 SLC4A7Q9Y6M7 1214 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 KCNA4P22459 653 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 TRIM33Q9UPN9 1127 aa15.95■□□□□ 0.14
LMX1B-201ENST00000355497 STAT2P52630 851 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 RGS9BPQ6ZS82 235 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 CNKSR1Q969H4 720 aa15.94■□□□□ 0.14
LMX1B-201ENST00000355497 MMTAG2Q9BU76 263 aaKnown RBP15.94■□□□□ 0.14
LMX1B-201ENST00000355497 KIF17Q9P2E2 1029 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms