RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 ITGB3BPQ13352 177 aaPredicted RBP13.05□□□□□ -0.32
CDRT1-202ENST00000354433 SKIV2LQ15477 1246 aaKnown RBP13.05□□□□□ -0.32
CDRT1-202ENST00000354433 PKN1Q16512 942 aa13.05□□□□□ -0.32
CDRT1-202ENST00000354433 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
CDRT1-202ENST00000354433 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
CDRT1-202ENST00000354433 CPLX2Q6PUV4 134 aaKnown RBP13.05□□□□□ -0.32
CDRT1-202ENST00000354433 BICD2Q8TD16 824 aa13.05□□□□□ -0.32
CDRT1-202ENST00000354433 RASGRP4Q8TDF6 673 aa13.05□□□□□ -0.32
CDRT1-202ENST00000354433 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
CDRT1-202ENST00000354433 UIMC1Q96RL1 719 aa13.05□□□□□ -0.32
CDRT1-202ENST00000354433 VPS54Q9P1Q0 977 aa13.05□□□□□ -0.32
CDRT1-202ENST00000354433 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
CDRT1-202ENST00000354433 FAM86B1E9PN63 330 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 RFXAPO00287 272 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 ARHGEF15O94989 841 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 FAM86B2P0C5J1 330 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 GHRP10912 638 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 IFNAR1P17181 557 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 STAT5BP51692 787 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 SETQ01105 290 aaPredicted RBP13.04□□□□□ -0.32
CDRT1-202ENST00000354433 PLEKHG4Q58EX7 1191 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
CDRT1-202ENST00000354433 RUFY4Q6ZNE9 571 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 COL25A1Q9BXS0 654 aaPredicted RBP13.04□□□□□ -0.32
CDRT1-202ENST00000354433 IFIH1Q9BYX4 1025 aaKnown RBP13.04□□□□□ -0.32
CDRT1-202ENST00000354433 FAM49AQ9H0Q0 323 aaPredicted RBP13.04□□□□□ -0.32
CDRT1-202ENST00000354433 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
CDRT1-202ENST00000354433 PRDM6Q9NQX0 595 aa13.04□□□□□ -0.32
CDRT1-202ENST00000354433 SPTBN5Q9NRC6 3674 aaKnown RBP13.03□□□□□ -0.32
CDRT1-202ENST00000354433 MEIS1O00470 390 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 MBD3O95983 291 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 INSRRP14616 1297 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 NLRP5P59047 1200 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 ADAM17P78536 824 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 SSRP1Q08945 709 aaKnown RBP13.03□□□□□ -0.32
CDRT1-202ENST00000354433 NTRK3Q16288 839 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 DNAJB3Q8WWF6 145 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 PCYT2Q99447 389 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 RAD9AQ99638 391 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 ZNF577Q9BSK1 485 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 THEGQ9P2T0 379 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 EPOPA6NHQ4 379 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 RRN3P2A6NIE6 340 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 H3BQV1 296 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 M0QZ92 97 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 IPO5O00410 1097 aaKnown RBP13.03□□□□□ -0.32
CDRT1-202ENST00000354433 PRPF40AO75400 957 aaKnown RBP13.03□□□□□ -0.32
CDRT1-202ENST00000354433 UPP2O95045 317 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 PRR16Q569H4 304 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 FAM160B1Q5W0V3 765 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 MIS18BP1Q6P0N0 1132 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 NIPA1Q7RTP0 329 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 APBB2Q92870 758 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 ZBTB10Q96DT7 871 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 YME1L1Q96TA2 773 aa13.03□□□□□ -0.32
CDRT1-202ENST00000354433 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-202ENST00000354433 STK36Q9NRP7 1315 aa13.02□□□□□ -0.32
CDRT1-202ENST00000354433 PRUNE2Q8WUY3 3088 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 POTEB3A0JP26 581 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 PLCB4Q15147 1175 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 POTEBQ6S5H4 581 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 PLPPR4Q7Z2D5 763 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 TRMT1LQ7Z2T5 733 aaKnown RBP13.02□□□□□ -0.33
CDRT1-202ENST00000354433 CKAP2LQ8IYA6 745 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 GDPD5Q8WTR4 605 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 TRAPPC12Q8WVT3 735 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 OSBPL7Q9BZF2 842 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 ZNF302Q9NR11 478 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 INSL6Q9Y581 213 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 CDY2AQ9Y6F7 541 aa13.02□□□□□ -0.33
CDRT1-202ENST00000354433 IGLV3-22A0A075B6J6 115 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 MBLAC1A4D2B0 266 aaPredicted RBP13.01□□□□□ -0.33
CDRT1-202ENST00000354433 ADAMTS3O15072 1205 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 DEXIO95424 95 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 CCNE2O96020 404 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 CHRNA1P02708 482 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 RPLP2P05387 115 aaKnown RBP13.01□□□□□ -0.33
CDRT1-202ENST00000354433 CYP3A4P08684 503 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 FDPSP14324 419 aaKnown RBP13.01□□□□□ -0.33
CDRT1-202ENST00000354433 NCLP19338 710 aaKnown RBP13.01□□□□□ -0.33
CDRT1-202ENST00000354433 SLC26A2P50443 739 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 MRPS6P82932 125 aaKnown RBP13.01□□□□□ -0.33
CDRT1-202ENST00000354433 TMEM62Q0P6H9 643 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 FAM26DQ5JW98 314 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 MARCH8Q5T0T0 291 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 CCDC60Q8IWA6 550 aaPredicted RBP13.01□□□□□ -0.33
CDRT1-202ENST00000354433 TGS1Q96RS0 853 aaKnown RBP13.01□□□□□ -0.33
CDRT1-202ENST00000354433 TBC1D22BQ9NU19 505 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 GINS2Q9Y248 185 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 CHD9Q3L8U1 2897 aa13.01□□□□□ -0.33
CDRT1-202ENST00000354433 LINC01553A4QN01 128 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 KRT85P78386 507 aa13□□□□□ -0.33
CDRT1-202ENST00000354433 MGAT3Q09327 533 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms