RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CFAP57Q96MR6 1250 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 KIAA1024Q9UPX6 916 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 CYP19A1P11511 503 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 XRCC5P13010 732 aaKnown RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 CYP2J2P51589 502 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 PAK2Q13177 524 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 UBE2SQ16763 222 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 CEP85LQ5SZL2 805 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 MAP7D3Q8IWC1 876 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 UHMK1Q8TAS1 419 aaKnown RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 BCAS4Q8TDM0 211 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 HTATIP2Q9BUP3 242 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 NSRP1Q9H0G5 558 aaKnown RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 DPH5Q9H2P9 285 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 DISC1Q9NRI5 854 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 A6NJR5 290 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 RNF8O76064 485 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 ZNF18P17022 549 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 EIF2AK2P19525 551 aaKnown RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 EIF4A3P38919 411 aaKnown RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 SLFN12LQ6IEE8 588 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 N4BP2L2Q92802 583 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 MRRFQ96E11 262 aaKnown RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 KRT12Q99456 494 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 FAM184BQ9ULE4 1060 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 SFSWAPQ12872 951 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 ALCAMQ13740 583 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 SCYL2Q6P3W7 929 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 NYAP1Q6ZVC0 841 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 PRPF38AQ8NAV1 312 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 LARP4BQ92615 738 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 CELF1Q92879 486 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 FNDC3AQ9Y2H6 1198 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 CPDO75976 1380 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 EEF1GP26641 437 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 GMPSP49915 693 aaPredicted RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 CDC37Q16543 378 aaPredicted RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 ANGEL2Q5VTE6 544 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 LRRN4CLQ8ND94 238 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 ACCSQ96QU6 501 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 POLD4Q9HCU8 107 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 DPP7Q9UHL4 492 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 ADAM21Q9UKJ8 722 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 STK36Q9NRP7 1315 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 TRAPPC10P48553 1259 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 PPFIA1Q13136 1202 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 ADAM9Q13443 819 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 C1orf167Q5SNV9 1468 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 SGMS1Q86VZ5 419 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 OR6J1Q8NGC5 347 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 SMC6Q96SB8 1091 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 MAGEF1Q9HAY2 307 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 MRFAP1Q9Y605 127 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 KRT17Q04695 432 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 E2F5Q15329 346 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 AGBL3Q8NEM8 1001 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 CCDC26Q8TAB7 109 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 EHD2Q9NZN4 543 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 MYO1AQ9UBC5 1043 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 TRIM10Q9UDY6 481 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 MKRN1Q9UHC7 482 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 TECPR2O15040 1411 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 MEIS1O00470 390 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 MED7O43513 233 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 TADA3O75528 432 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 PPARGP37231 505 aaPredicted RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 FAM26FQ5R3K3 315 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 KSR1Q8IVT5 923 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 GPRC5AQ8NFJ5 357 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 HPS3Q969F9 1004 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 CAPS2Q9BXY5 557 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 TRIM7Q9C029 511 aa11.78□□□□□ -0.52
CLCN6-202ENST00000346436 RRP15Q9Y3B9 282 aaKnown RBP11.78□□□□□ -0.52
CLCN6-202ENST00000346436 ABCC12Q96J65 1359 aa11.77□□□□□ -0.52
CLCN6-202ENST00000346436 MANSC4A6NHS7 340 aaPredicted RBP11.77□□□□□ -0.52
CLCN6-202ENST00000346436 C6orf222P0C671 652 aaPredicted RBP11.77□□□□□ -0.52
CLCN6-202ENST00000346436 DLATP10515 647 aaKnown RBP11.77□□□□□ -0.52
CLCN6-202ENST00000346436 CYP2B6P20813 491 aa11.77□□□□□ -0.52
CLCN6-202ENST00000346436 PPP2R5DQ14738 602 aa11.77□□□□□ -0.52
CLCN6-202ENST00000346436 HAUS6Q7Z4H7 955 aa11.77□□□□□ -0.52
CLCN6-202ENST00000346436 RMDN3Q96TC7 470 aa11.77□□□□□ -0.52
CLCN6-202ENST00000346436 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.52
CLCN6-202ENST00000346436 TFR2Q9UP52 801 aa11.77□□□□□ -0.52
CLCN6-202ENST00000346436 AP3B2Q13367 1082 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 RSBN1LQ6PCB5 846 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 NOP9Q86U38 636 aaKnown RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 UTP11Q9Y3A2 253 aaKnown RBP11.77□□□□□ -0.53
CLCN6-202ENST00000346436 WDR19Q8NEZ3 1342 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 PDE6CP51160 858 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 SDE2Q6IQ49 451 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 ARFGAP2Q8N6H7 521 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 GJA10Q969M2 543 aa11.77□□□□□ -0.53
CLCN6-202ENST00000346436 FAM149B1Q96BN6 582 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms