RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 GRAMD4Q6IC98 578 aa16.73■□□□□ 0.27
SRPK1-201ENST00000346162 PNKPQ96T60 521 aa16.73■□□□□ 0.27
SRPK1-201ENST00000346162 CDAN1Q8IWY9 1227 aa16.73■□□□□ 0.27
SRPK1-201ENST00000346162 NME8Q8N427 588 aa16.73■□□□□ 0.27
SRPK1-201ENST00000346162 DPF2Q92785 391 aa16.73■□□□□ 0.27
SRPK1-201ENST00000346162 ARHGEF1Q92888 912 aaKnown RBP16.73■□□□□ 0.27
SRPK1-201ENST00000346162 NHEJ1Q9H9Q4 299 aaPredicted RBP16.73■□□□□ 0.27
SRPK1-201ENST00000346162 EIF4A3P38919 411 aaKnown RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 EIF3BP55884 814 aaKnown RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 ANTXR2P58335 489 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 MAP7D3Q8IWC1 876 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 NOA1Q8NC60 698 aaKnown RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 USP17L5A8MUK1 530 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 GAS8O95995 478 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 AFPP02771 609 aaKnown RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 PAPOLAP51003 745 aaKnown RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 TPD52P55327 224 aaPredicted RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 LRRC63Q05C16 580 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 NBPF20Q3BBV1 942 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 FAM186BQ8IYM0 893 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 ZNF512BQ96KM6 892 aaPredicted RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 ZNF577Q9BSK1 485 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 ORC4O43929 436 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 ZRANB2O95218 330 aaKnown RBP eCLIP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 GNAT1P11488 350 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 GAP43P17677 238 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 SERPINB6P35237 376 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 PLTPP55058 493 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 RNF217Q8TC41 542 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 GLG1Q92896 1179 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 WDR11Q9BZH6 1224 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 CCNI2Q6ZMN8 369 aaPredicted RBP16.72■□□□□ 0.27
SRPK1-201ENST00000346162 AS3MTQ9HBK9 375 aa16.72■□□□□ 0.27
SRPK1-201ENST00000346162 A0A0G2JLW4 131 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 ANO9A1A5B4 782 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 RNASELQ05823 741 aaKnown RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 DCAF15Q66K64 600 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 TMEM154Q6P9G4 183 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 B4GALNT2Q8NHY0 566 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 CEP95Q96GE4 821 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 NUDCD1Q96RS6 583 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 ECT2Q9H8V3 914 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 TRIM49BA6NDI0 452 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 CLIC2O15247 247 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 LMNAP02545 664 aaKnown RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 DLATP10515 647 aaKnown RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 FDPSP14324 419 aaKnown RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 PRCPP42785 496 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 MRPS35P82673 323 aaKnown RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 ANO3Q9BYT9 981 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 XAB2Q9HCS7 855 aaKnown RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 MROH2AA6NES4 1674 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 I3L4J1 428 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 NPR1P16066 1061 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 PSMC2P35998 433 aaKnown RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 LIG4P49917 911 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 METTL16Q86W50 562 aaKnown RBP16.71■□□□□ 0.27
SRPK1-201ENST00000346162 MAIP1Q8WWC4 291 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 RHBDL2Q9NX52 303 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 TXNDC16Q9P2K2 825 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 BCAP29Q9UHQ4 241 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 SLC4A7Q9Y6M7 1214 aa16.71■□□□□ 0.27
SRPK1-201ENST00000346162 FTCDO95954 541 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 DEUP1Q05D60 604 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 PNMA2Q9UL42 364 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 FAM107AO95990 144 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 KRT14P02533 472 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 CCND1P24385 295 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 STAT2P52630 851 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 GRM4Q14833 912 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 PPP1R21Q6ZMI0 780 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 FAM210AQ96ND0 272 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 MMS19Q96T76 1030 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 C1orf112Q9NSG2 853 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 KRT19P08727 400 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 KCNB2Q92953 911 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 NSUN4Q96CB9 384 aaKnown RBP16.7■□□□□ 0.26
SRPK1-201ENST00000346162 NACC1Q96RE7 527 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 POTEMA6NI47 508 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 LGALS16A8MUM7 142 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 ANP32DO95626 131 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 PLCB4Q15147 1175 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 CYFIP2Q96F07 1278 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 FUCA2Q9BTY2 467 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 DLGAP2Q9P1A6 1054 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 DAAM1Q9Y4D1 1078 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 MROH7-TTC4A0A0A0MT08 1334 aa16.7■□□□□ 0.26
SRPK1-201ENST00000346162 LRRIQ3A6PVS8 624 aaPredicted RBP16.69■□□□□ 0.26
SRPK1-201ENST00000346162 HOXA7P31268 230 aaPredicted RBP16.69■□□□□ 0.26
SRPK1-201ENST00000346162 BAG6P46379 1132 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms