RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ZNF484Q5JVG2 852 aa18.17■□□□□ 0.5
ATG4B-201ENST00000344376 NSUN7Q8NE18 718 aaKnown RBP18.17■□□□□ 0.5
ATG4B-201ENST00000344376 TRAPPC12Q8WVT3 735 aa18.17■□□□□ 0.5
ATG4B-201ENST00000344376 SLC5A5Q92911 643 aa18.17■□□□□ 0.5
ATG4B-201ENST00000344376 NAP1L4Q99733 375 aaKnown RBP18.17■□□□□ 0.5
ATG4B-201ENST00000344376 DDX25Q9UHL0 483 aaKnown RBP18.17■□□□□ 0.5
ATG4B-201ENST00000344376 PCDHA2Q9Y5H9 948 aa18.17■□□□□ 0.5
ATG4B-201ENST00000344376 CHMP2AO43633 222 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 EDIL3O43854 480 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 KRT2P35908 639 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 JAK3P52333 1124 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 MRPS6P82932 125 aaKnown RBP18.16■□□□□ 0.5
ATG4B-201ENST00000344376 TCTN1Q2MV58 587 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 IER5Q5VY09 327 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 NEK8Q86SG6 692 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 MAFAQ8NHW3 353 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-201ENST00000344376 BBXQ8WY36 941 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-201ENST00000344376 FAM167AQ96KS9 214 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
ATG4B-201ENST00000344376 PRDM12Q9H4Q4 367 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 DISC1Q9NRI5 854 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 GABBR1Q9UBS5 961 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 MAFBQ9Y5Q3 323 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-201ENST00000344376 TET1Q8NFU7 2136 aa18.16■□□□□ 0.5
ATG4B-201ENST00000344376 CHRNA1P02708 482 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 FDPSP14324 419 aaKnown RBP18.15■□□□□ 0.5
ATG4B-201ENST00000344376 GCFC2P16383 781 aaKnown RBP18.15■□□□□ 0.5
ATG4B-201ENST00000344376 MTHFD1LQ6UB35 978 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 PIK3AP1Q6ZUJ8 805 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 SLC17A8Q8NDX2 589 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 RDM1Q8NG50 284 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 MBOAT7Q96N66 472 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
ATG4B-201ENST00000344376 CEP131Q9UPN4 1083 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 CDY2AQ9Y6F7 541 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 KAT6AQ92794 2004 aa18.15■□□□□ 0.5
ATG4B-201ENST00000344376 IGSF9BQ9UPX0 1349 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 SMIM35A0A1B0GVV1 85 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 DTNBO60941 627 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 GJB5O95377 273 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 GHRP10912 638 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 MGAT3Q09327 533 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 MYOCDQ8IZQ8 938 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 NME8Q8N427 588 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 ZBTB10Q96DT7 871 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 RAD9AQ99638 391 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 GJB4Q9NTQ9 266 aa18.14■□□□□ 0.49
ATG4B-201ENST00000344376 KLRC1P26715 233 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 MIER3Q7Z3K6 550 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 OXER1Q8TDS5 423 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 ZSCAN31Q96LW9 406 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-201ENST00000344376 UNC45AQ9H3U1 944 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 TRPV2Q9Y5S1 764 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 CCNT1O60563 726 aaKnown RBP18.13■□□□□ 0.49
ATG4B-201ENST00000344376 JAK2O60674 1132 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 PSMD10O75832 226 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 LPIN1Q14693 890 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 FBXO47Q5MNV8 452 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 PPP4R3AQ6IN85 833 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 FAM117BQ6P1L5 589 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.13■□□□□ 0.49
ATG4B-201ENST00000344376 TSHZ1Q6ZSZ6 1077 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 TRMT1LQ7Z2T5 733 aaKnown RBP18.13■□□□□ 0.49
ATG4B-201ENST00000344376 TMCO2Q7Z6W1 182 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-201ENST00000344376 USP38Q8NB14 1042 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 ETNPPLQ8TBG4 499 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 SH2B1Q9NRF2 756 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-201ENST00000344376 NRBP2Q9NSY0 501 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 SQORQ9Y6N5 450 aa18.13■□□□□ 0.49
ATG4B-201ENST00000344376 GBF1Q92538 1859 aa18.12■□□□□ 0.49
ATG4B-201ENST00000344376 MARCH6O60337 910 aa18.12■□□□□ 0.49
ATG4B-201ENST00000344376 ATP4AP20648 1035 aa18.12■□□□□ 0.49
ATG4B-201ENST00000344376 RBM25P49756 843 aaKnown RBP18.12■□□□□ 0.49
ATG4B-201ENST00000344376 MKRN4PQ13434 485 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-201ENST00000344376 CCDC83Q8IWF9 413 aa18.12■□□□□ 0.49
ATG4B-201ENST00000344376 GJA10Q969M2 543 aa18.12■□□□□ 0.49
ATG4B-201ENST00000344376 LLPHQ9BRT6 129 aaKnown RBP18.12■□□□□ 0.49
ATG4B-201ENST00000344376 OSBPL7Q9BZF2 842 aa18.12■□□□□ 0.49
ATG4B-201ENST00000344376 SLC37A4O43826 429 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 MMP1P03956 469 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 OATP04181 439 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 IGFBP4P22692 258 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 FOSBP53539 338 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 PRKCEQ02156 737 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 TAP1Q03518 808 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 TMEM62Q0P6H9 643 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 FAM20AQ96MK3 541 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 CELF4Q9BZC1 486 aaKnown RBP18.11■□□□□ 0.49
ATG4B-201ENST00000344376 INSL6Q9Y581 213 aa18.11■□□□□ 0.49
ATG4B-201ENST00000344376 ZBTB42B2RXF5 422 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 MAGEB2O15479 319 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 C22orf31O95567 290 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 NR5A1Q13285 461 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 RABEP1Q15276 862 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
ATG4B-201ENST00000344376 KRT40Q6A162 431 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 DIS3L2Q8IYB7 885 aaKnown RBP18.1■□□□□ 0.49
ATG4B-201ENST00000344376 METTL13Q8N6R0 699 aa18.1■□□□□ 0.49
ATG4B-201ENST00000344376 ARNTL2Q8WYA1 636 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms