RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 PLCB1Q9NQ66 1216 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 LARSQ9P2J5 1176 aaKnown RBP13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 RAB21Q9UL25 225 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 AGTPBP1Q9UPW5 1226 aa13.49□□□□□ -0.25
SNRNP48-201ENST00000342415 SPATA31D1Q6ZQQ2 1576 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 MAP2K7O14733 419 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 NR3C1P04150 777 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 DCUN1D2Q6PH85 259 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 FAM47EQ6ZV65 393 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 MIER3Q7Z3K6 550 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 GLIS3Q8NEA6 775 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 MDM1Q8TC05 714 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 KLHL29Q96CT2 875 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 MED15Q96RN5 788 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 NTSR2O95665 410 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 ALAS1P13196 640 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 GCLMP48507 274 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 SMTNP53814 917 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 HHATQ5VTY9 493 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 HEMGNQ9BXL5 484 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 LMNB1P20700 586 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 RASA1P20936 1047 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 GUCY2CP25092 1073 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 ALDH3A1P30838 453 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 SLC18A3Q16572 532 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 TRIM7Q9C029 511 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 KLHL14Q9P2G3 628 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
SNRNP48-201ENST00000342415 RASGRF2O14827 1237 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 MEFVO15553 781 aaPredicted RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 NMT1P30419 496 aaKnown RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 PTK2Q05397 1052 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 GLE1Q53GS7 698 aaKnown RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 SPATS2Q86XZ4 545 aaKnown RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 C7orf25Q9BPX7 421 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 MXD3Q9BW11 206 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 WDR91A4D1P6 747 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 FAM153BP0C7A2 387 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 FAM153CQ494X1 144 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 XKR9Q5GH70 373 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 ZNF473Q8WTR7 871 aaKnown RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 KCND1Q9NSA2 647 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 FAM153AQ9UHL3 310 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 EPHB6O15197 1021 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 CD19P15391 556 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 TTLL12Q14166 644 aaPredicted RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 DRAP1Q14919 205 aaPredicted RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 QRICH1Q2TAL8 776 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 PAPD7Q5XG87 772 aaKnown RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 PACS2Q86VP3 889 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 ELOA2Q8IYF1 753 aaPredicted RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 DUSP9Q99956 384 aaKnown RBP13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 KBTBD4Q9NVX7 518 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 ZNF148Q9UQR1 794 aa13.47□□□□□ -0.25
SNRNP48-201ENST00000342415 SERPINB2P05120 415 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 MDH1P40925 334 aaKnown RBP13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 PRKG1Q13976 671 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 IL17AQ16552 155 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 SGO2Q562F6 1265 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 VGLL2Q8N8G2 317 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 NUDT12Q9BQG2 462 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 AZI2Q9H6S1 392 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 ARHGEF10LQ9HCE6 1279 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 ARHGAP4P98171 946 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 SEPT2Q15019 361 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 KNOP1Q1ED39 458 aaKnown RBP13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 PAXIP1Q6ZW49 1069 aaPredicted RBP13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 NEDD1Q8NHV4 660 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 SLIT1O75093 1534 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 OVOS2A0A0G2JMS6 1433 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 ZBTB5O15062 677 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 UCHL3P15374 230 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 ATP5DP30049 168 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 WDR59Q6PJI9 974 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 CLEC4GQ6UXB4 293 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 TSEN2Q8NCE0 465 aaKnown RBP13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 PSMD1Q99460 953 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 ZNF577Q9BSK1 485 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 PARVGQ9HBI0 331 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 PNMA2Q9UL42 364 aa13.46□□□□□ -0.25
SNRNP48-201ENST00000342415 FGFR4P22455 802 aa13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 SSTR3P32745 418 aaPredicted RBP13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 GCKP35557 465 aa13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 TRAF1Q13077 416 aa13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 CUL1Q13616 776 aa13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 KIAA0895Q8NCT3 520 aa13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 GLG1Q92896 1179 aa13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 ERGIC2Q96RQ1 377 aa13.46□□□□□ -0.26
SNRNP48-201ENST00000342415 TACC3Q9Y6A5 838 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms