RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RASGEF1CQ8N431 466 aa20.12■□□□□ 0.81
SMPD1-201ENST00000342245 FBXO41Q8TF61 875 aa20.12■□□□□ 0.81
SMPD1-201ENST00000342245 CEP72Q9P209 647 aa20.12■□□□□ 0.81
SMPD1-201ENST00000342245 WNT7AO00755 349 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 EPHB6O15197 1021 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 UPP2O95045 317 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 PMS2P54278 862 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 NAP1L3Q99457 506 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-201ENST00000342245 CCDC28BQ9BUN5 200 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 MMADHCQ9H3L0 296 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-201ENST00000342245 NOC2LQ9Y3T9 749 aaKnown RBP20.11■□□□□ 0.81
SMPD1-201ENST00000342245 PEX11AO75192 247 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 ADORA1P30542 326 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 ACVR2BQ13705 512 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 SCARF1Q14162 830 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 MYBPC3Q14896 1274 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 DYDC1Q8WWB3 177 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 GRAMD1AQ96CP6 724 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 STRBPQ96SI9 672 aaKnown RBP20.11■□□□□ 0.81
SMPD1-201ENST00000342245 LRMDAQ9H2I8 198 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 RNF41Q9H4P4 317 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-201ENST00000342245 PDP2Q9P2J9 529 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 PRKAG3Q9UGI9 489 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 CD2APQ9Y5K6 639 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 MROH7Q68CQ1 1323 aa20.11■□□□□ 0.81
SMPD1-201ENST00000342245 DBN1Q16643 649 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 INPP5DQ92835 1189 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 FAM136AQ96C01 138 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 TIPINQ9BVW5 301 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 UBE2OQ9C0C9 1292 aaKnown RBP20.1■□□□□ 0.81
SMPD1-201ENST00000342245 CCSER1Q9C0I3 900 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 DDX47Q9H0S4 455 aaKnown RBP20.1■□□□□ 0.81
SMPD1-201ENST00000342245 KLHL14Q9P2G3 628 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 ATP6V0A2Q9Y487 856 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 GMEB1Q9Y692 573 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 ATP8B3O60423 1300 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 SKIP12755 728 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 ITGA6P23229 1130 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 RFC5P40937 340 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 NAALADL2Q58DX5 795 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 CNNM4Q6P4Q7 775 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 IFNL3Q8IZI9 196 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 CMTR1Q8N1G2 835 aaKnown RBP20.1■□□□□ 0.81
SMPD1-201ENST00000342245 SHISA4Q96DD7 197 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 AIPL1Q9NZN9 384 aa20.1■□□□□ 0.81
SMPD1-201ENST00000342245 NKX1-2Q9UD57 310 aaPredicted RBP20.1■□□□□ 0.81
SMPD1-201ENST00000342245 COL22A1Q8NFW1 1626 aaPredicted RBP20.09■□□□□ 0.81
SMPD1-201ENST00000342245 SHBGP04278 402 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 MUM1Q2TAK8 710 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 FITM2Q8N6M3 262 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 RBM17Q96I25 401 aaKnown RBP20.09■□□□□ 0.81
SMPD1-201ENST00000342245 ZCWPW1Q9H0M4 648 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 AZI2Q9H6S1 392 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 ETNK1Q9HBU6 452 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 PACSIN2Q9UNF0 486 aaPredicted RBP20.09■□□□□ 0.81
SMPD1-201ENST00000342245 EIF4E1BA6NMX2 242 aaKnown RBP20.09■□□□□ 0.81
SMPD1-201ENST00000342245 TULP1O00294 542 aaPredicted RBP20.09■□□□□ 0.81
SMPD1-201ENST00000342245 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
SMPD1-201ENST00000342245 MCM7P33993 719 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 PDE4DQ08499 809 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 TNFAIP8L3Q5GJ75 292 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 RNF220Q5VTB9 566 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 NUDCD1Q96RS6 583 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 ATP8A2Q9NTI2 1148 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 STOML1Q9UBI4 398 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 AMACRQ9UHK6 382 aa20.09■□□□□ 0.81
SMPD1-201ENST00000342245 ZC3H6P61129 1189 aaKnown RBP20.08■□□□□ 0.81
SMPD1-201ENST00000342245 CLUL1Q15846 466 aa20.08■□□□□ 0.81
SMPD1-201ENST00000342245 CENPPQ6IPU0 288 aa20.08■□□□□ 0.81
SMPD1-201ENST00000342245 TMC4Q7Z404 712 aa20.08■□□□□ 0.81
SMPD1-201ENST00000342245 TTC7AQ9ULT0 858 aaPredicted RBP20.08■□□□□ 0.81
SMPD1-201ENST00000342245 ZNF532Q9HCE3 1301 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 UBA7P41226 1012 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 RASSF2P50749 326 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 SLC39A6Q13433 755 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 DTHD1Q6ZMT9 781 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 KRT28Q7Z3Y7 464 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 ZNF526Q8TF50 670 aaPredicted RBP20.08■□□□□ 0.8
SMPD1-201ENST00000342245 PTPRN2Q92932 1015 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 ZNF594Q96JF6 807 aaPredicted RBP20.08■□□□□ 0.8
SMPD1-201ENST00000342245 AP1M1Q9BXS5 423 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 DCLRE1BQ9H816 532 aa20.08■□□□□ 0.8
SMPD1-201ENST00000342245 LARSQ9P2J5 1176 aaKnown RBP20.08■□□□□ 0.8
SMPD1-201ENST00000342245 MAGEA13PA6NCF6 341 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 FAM187AA6NFU0 413 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 TTI1O43156 1089 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 PTDSS1P48651 473 aaKnown RBP20.07■□□□□ 0.8
SMPD1-201ENST00000342245 DRG2P55039 364 aaKnown RBP20.07■□□□□ 0.8
SMPD1-201ENST00000342245 AMPD3Q01432 767 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 MFSD5Q6N075 450 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 FOXR2Q6PJQ5 311 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 MYLK4Q86YV6 388 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-201ENST00000342245 GBP5Q96PP8 586 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 C7orf25Q9BPX7 421 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 ZNF232Q9UNY5 417 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 DIS3Q9Y2L1 958 aaKnown RBP20.07■□□□□ 0.8
SMPD1-201ENST00000342245 KIF1AQ12756 1690 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 C1orf167Q5SNV9 1468 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 NVLO15381 856 aaKnown RBP20.07■□□□□ 0.8
SMPD1-201ENST00000342245 CALM1P0DP23 149 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms