RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 ASTN1O14525 1302 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 FRMD3A2A2Y4 597 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 ZNF233A6NK53 670 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 TMCO5BA8MYB1 307 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 GOLGA8KD6RF30 607 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 G3V3G9 751 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 EML1O00423 815 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 CHMP2AO43633 222 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 ONECUT3O60422 494 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-202ENST00000342084 GCNT3O95395 438 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 GNA14O95837 355 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 UCHL3P15374 230 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 PON1P27169 355 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 CRKP46108 304 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 RBM5P52756 815 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRR-202ENST00000342084 UBXN2AP68543 259 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 PPFIA1Q13136 1202 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 COG2Q14746 738 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 DCAF8Q5TAQ9 597 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 ZC3H3Q8IXZ2 948 aaKnown RBP7.97□□□□□ -1.13
PTPRR-202ENST00000342084 SP8Q8IXZ3 490 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 IFT20Q8IY31 132 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 SPICE1Q8N0Z3 855 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 PIGOQ8TEQ8 1089 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 SYN2Q92777 582 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-202ENST00000342084 TEKT1Q969V4 418 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 LENG9Q96B70 501 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 CRAMP1Q96RY5 1269 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 AIPL1Q9NZN9 384 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 ARMCX3Q9UH62 379 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-202ENST00000342084 BCS1LQ9Y276 419 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 PCDHB13Q9Y5F0 798 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 PCDHGC5Q9Y5F6 944 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 SIPA1L1O43166 1804 aa7.97□□□□□ -1.13
PTPRR-202ENST00000342084 GREB1LQ9C091 1923 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-202ENST00000342084 CEP104O60308 925 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 AFPP02771 609 aaKnown RBP7.96□□□□□ -1.13
PTPRR-202ENST00000342084 NR3C1P04150 777 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 TNFRSF8P28908 595 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 NMT1P30419 496 aaKnown RBP7.96□□□□□ -1.13
PTPRR-202ENST00000342084 ERVK-9P63128 1117 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 CTTNQ14247 550 aaKnown RBP7.96□□□□□ -1.13
PTPRR-202ENST00000342084 EPHA7Q15375 998 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 KNOP1Q1ED39 458 aaKnown RBP7.96□□□□□ -1.13
PTPRR-202ENST00000342084 CERKLQ49MI3 558 aaPredicted RBP7.96□□□□□ -1.13
PTPRR-202ENST00000342084 ZC2HC1CQ53FD0 456 aaPredicted RBP7.96□□□□□ -1.13
PTPRR-202ENST00000342084 CFAP58Q5T655 872 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 PACS2Q86VP3 889 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 USP38Q8NB14 1042 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 OR2W6PQ8NHA6 318 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 BCAS4Q8TDM0 211 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 GJD4Q96KN9 370 aaPredicted RBP7.96□□□□□ -1.13
PTPRR-202ENST00000342084 NUCKS1Q9H1E3 243 aaKnown RBP7.96□□□□□ -1.13
PTPRR-202ENST00000342084 NEUROG2Q9H2A3 272 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 SIX2Q9NPC8 291 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 FAM198AQ9UFP1 575 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 LRRC37AA6NMS7 1700 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 QSER1Q2KHR3 1735 aa7.96□□□□□ -1.13
PTPRR-202ENST00000342084 CYP3A7-CYP3A51PA0A087WV96 503 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 F5H6K3 240 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 OPLAHO14841 1288 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 EIF3HO15372 352 aaKnown RBP eCLIP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 MSH4O15457 936 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 OPA1O60313 960 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 ZEB2O60315 1214 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 GFPT2O94808 682 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 KIF4AO95239 1232 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 NDUFB10O96000 172 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 XRCC5P13010 732 aaKnown RBP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 ITGA4P13612 1032 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 CYP3A7P24462 503 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 USP11P51784 963 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 CORO7P57737 925 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 ICA1Q05084 483 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 KLRC3Q07444 240 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 PAK2Q13177 524 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 NNTQ13423 1086 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 HLTFQ14527 1009 aaKnown RBP eCLIP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 RRP1BQ14684 758 aaKnown RBP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 RPS6KA1Q15418 735 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 EXOC3L4Q17RC7 722 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 FOXR2Q6PJQ5 311 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 EPM2AIP1Q7L775 607 aaPredicted RBP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 SLFN12Q8IYM2 578 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 SYT2Q8N9I0 419 aaPredicted RBP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 U2AF1L4Q8WU68 220 aaKnown RBP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 CRYGNQ8WXF5 182 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 TAF4BQ92750 862 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 RNPC3Q96LT9 517 aaKnown RBP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 MBOAT7Q96N66 472 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 DDX47Q9H0S4 455 aaKnown RBP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 LUC7LQ9NQ29 371 aaKnown RBP7.96□□□□□ -1.14
PTPRR-202ENST00000342084 GCNT4Q9P109 453 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 TSKSQ9UJT2 592 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 NAGPAQ9UK23 515 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 VAV3Q9UKW4 847 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 DNM3Q9UQ16 869 aa7.96□□□□□ -1.14
PTPRR-202ENST00000342084 NRXN2Q9P2S2 1712 aa7.95□□□□□ -1.14
PTPRR-202ENST00000342084 SPDYE3A6NKU9 549 aa7.95□□□□□ -1.14
PTPRR-202ENST00000342084 DDX3XO00571 662 aaKnown RBP eCLIP7.95□□□□□ -1.146e-6■■□□□ 14.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms