RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CCDC60Q8IWA6 550 aaPredicted RBP22.84■■□□□ 1.25
SYNE2-201ENST00000341472 CKAP2LQ8IYA6 745 aa22.84■■□□□ 1.25
SYNE2-201ENST00000341472 SMAP1Q8IYB5 467 aaPredicted RBP22.84■■□□□ 1.25
SYNE2-201ENST00000341472 NME8Q8N427 588 aa22.84■■□□□ 1.25
SYNE2-201ENST00000341472 TBCKQ8TEA7 893 aa22.84■■□□□ 1.25
SYNE2-201ENST00000341472 TOP1MTQ969P6 601 aa22.84■■□□□ 1.25
SYNE2-201ENST00000341472 AIFM3Q96NN9 605 aa22.84■■□□□ 1.25
SYNE2-201ENST00000341472 PCDHA10Q9Y5I2 948 aa22.84■■□□□ 1.25
SYNE2-201ENST00000341472 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.83■■□□□ 1.25
SYNE2-201ENST00000341472 UPP2O95045 317 aa22.83■■□□□ 1.25
SYNE2-201ENST00000341472 PSAPP07602 524 aa22.83■■□□□ 1.25
SYNE2-201ENST00000341472 FBXO47Q5MNV8 452 aa22.83■■□□□ 1.25
SYNE2-201ENST00000341472 MTHFD1LQ6UB35 978 aa22.83■■□□□ 1.25
SYNE2-201ENST00000341472 MICALL1Q8N3F8 863 aa22.83■■□□□ 1.25
SYNE2-201ENST00000341472 LENG9Q96B70 501 aa22.83■■□□□ 1.25
SYNE2-201ENST00000341472 TGS1Q96RS0 853 aaKnown RBP22.83■■□□□ 1.25
SYNE2-201ENST00000341472 PRDM6Q9NQX0 595 aa22.83■■□□□ 1.25
SYNE2-201ENST00000341472 MTCH2Q9Y6C9 303 aa22.83■■□□□ 1.25
SYNE2-201ENST00000341472 SMIM35A0A1B0GVV1 85 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 LINC01553A4QN01 128 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 M0QZ92 97 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 MSH4O15457 936 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 ERVK-21P61565 698 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 HTRA4P83105 476 aaPredicted RBP22.82■■□□□ 1.24
SYNE2-201ENST00000341472 SPRED2Q7Z698 418 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 DAGLBQ8NCG7 672 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 RIT2Q99578 217 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 COL25A1Q9BXS0 654 aaPredicted RBP22.82■■□□□ 1.24
SYNE2-201ENST00000341472 TSPYL2Q9H2G4 693 aaPredicted RBP22.82■■□□□ 1.24
SYNE2-201ENST00000341472 SAMM50Q9Y512 469 aa22.82■■□□□ 1.24
SYNE2-201ENST00000341472 MAFBQ9Y5Q3 323 aaPredicted RBP22.82■■□□□ 1.24
SYNE2-201ENST00000341472 ENPP3O14638 875 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 XBP1P17861 261 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 ATP4AP20648 1035 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 AK2P54819 239 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 TMEM62Q0P6H9 643 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 GRB10Q13322 594 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 TSHZ1Q6ZSZ6 1077 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 YME1L1Q96TA2 773 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 CELF4Q9BZC1 486 aaKnown RBP22.81■■□□□ 1.24
SYNE2-201ENST00000341472 GABBR1Q9UBS5 961 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 MTUS1Q9ULD2 1270 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 KCNJ14Q9UNX9 436 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 TRPV2Q9Y5S1 764 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 SQORQ9Y6N5 450 aa22.81■■□□□ 1.24
SYNE2-201ENST00000341472 TANC1Q9C0D5 1861 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 CYP3A7-CYP3A51PA0A087WV96 503 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 WDR64B1ANS9 1081 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 M0R2N6 131 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 GAS7O60861 476 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 CYP3A7P24462 503 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 Q4G0T1 1027 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 TRMT1LQ7Z2T5 733 aaKnown RBP22.8■■□□□ 1.24
SYNE2-201ENST00000341472 BBXQ8WY36 941 aaPredicted RBP22.8■■□□□ 1.24
SYNE2-201ENST00000341472 SLC5A5Q92911 643 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 IL17RAQ96F46 866 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 AGO3Q9H9G7 860 aaKnown RBP22.8■■□□□ 1.24
SYNE2-201ENST00000341472 SUGCTQ9HAC7 445 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 DISC1Q9NRI5 854 aa22.8■■□□□ 1.24
SYNE2-201ENST00000341472 COL1A2P08123 1366 aa22.79■■□□□ 1.24
SYNE2-201ENST00000341472 CHD7Q9P2D1 2997 aa22.79■■□□□ 1.24
SYNE2-201ENST00000341472 NONOQ15233 471 aaKnown RBP eCLIP22.79■■□□□ 1.24
SYNE2-201ENST00000341472 NPY5RQ15761 445 aa22.79■■□□□ 1.24
SYNE2-201ENST00000341472 LRCH2Q5VUJ6 765 aa22.79■■□□□ 1.24
SYNE2-201ENST00000341472 KRT25Q7Z3Z0 450 aa22.79■■□□□ 1.24
SYNE2-201ENST00000341472 KIAA0319LQ8IZA0 1049 aa22.79■■□□□ 1.24
SYNE2-201ENST00000341472 SP7Q8TDD2 431 aaPredicted RBP22.79■■□□□ 1.24
SYNE2-201ENST00000341472 ATXN2LQ8WWM7 1075 aaKnown RBP22.79■■□□□ 1.24
SYNE2-201ENST00000341472 NRBP2Q9NSY0 501 aa22.79■■□□□ 1.24
SYNE2-201ENST00000341472 LPXNO60711 386 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 CD52P31358 61 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 SKIV2LQ15477 1246 aaKnown RBP22.78■■□□□ 1.24
SYNE2-201ENST00000341472 KRT40Q6A162 431 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 WASF1Q92558 559 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 SYMPKQ92797 1274 aaKnown RBP22.78■■□□□ 1.24
SYNE2-201ENST00000341472 PHF20Q9BVI0 1012 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 TEKT3Q9BXF9 490 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 LMCD1Q9NZU5 365 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 THEGQ9P2T0 379 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 ORC3Q9UBD5 711 aaPredicted RBP22.78■■□□□ 1.24
SYNE2-201ENST00000341472 STK36Q9NRP7 1315 aa22.78■■□□□ 1.24
SYNE2-201ENST00000341472 DOCK5Q9H7D0 1870 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 PRUNE2Q8WUY3 3088 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 UNC80Q8N2C7 3258 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 ZBTB42B2RXF5 422 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 CTDNEP1O95476 244 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 SEC24BO95487 1268 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 TDP2O95551 362 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 SFNP31947 248 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 NEK4P51957 841 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 TJAP1Q5JTD0 557 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 MOXD1Q6UVY6 613 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 NECAB1Q8N987 351 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 FAM167AQ96KS9 214 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 FTHL17Q9BXU8 183 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 PADI3Q9ULW8 664 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 CEP131Q9UPN4 1083 aa22.77■■□□□ 1.24
SYNE2-201ENST00000341472 CCDC194A0A1B0GVG4 234 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 CHMP2AO43633 222 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 DTNBO60941 627 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms