RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SPIRE1Q08AE8 756 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 TMEM266Q2M3C6 531 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 SPECC1Q5M775 1068 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 NFRKBQ6P4R8 1299 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 SLC43A3Q8NBI5 491 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 PLIN2Q99541 437 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 EIF2AK1Q9BQI3 630 aaKnown RBP14.84□□□□□ -0.03
TUBD1-202ENST00000340993 LXNQ9BS40 222 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 FAM49AQ9H0Q0 323 aaPredicted RBP14.84□□□□□ -0.03
TUBD1-202ENST00000340993 ZDHHC9Q9Y397 364 aa14.84□□□□□ -0.03
TUBD1-202ENST00000340993 RBM19Q9Y4C8 960 aaKnown RBP14.84□□□□□ -0.03
TUBD1-202ENST00000340993 LOXHD1Q8IVV2 1947 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 MROH7Q68CQ1 1323 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 IGSF9BQ9UPX0 1349 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 DDX11L8A8MPP1 907 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 CTSHP09668 335 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 CAPN2P17655 700 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 MTERF2Q49AM1 385 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 B3GNT9Q6UX72 402 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 RUFY4Q6ZNE9 571 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 ANKRD33Q7Z3H0 272 aa14.83□□□□□ -0.03
TUBD1-202ENST00000340993 IGKV6D-21A0A0A0MT36 114 aa14.83□□□□□ -0.04
TUBD1-202ENST00000340993 TMEM62Q0P6H9 643 aa14.83□□□□□ -0.04
TUBD1-202ENST00000340993 DTHD1Q6ZMT9 781 aa14.83□□□□□ -0.04
TUBD1-202ENST00000340993 PLPPR4Q7Z2D5 763 aa14.83□□□□□ -0.04
TUBD1-202ENST00000340993 SCLYQ96I15 445 aa14.83□□□□□ -0.04
TUBD1-202ENST00000340993 CTAGE1Q96RT6 745 aa14.83□□□□□ -0.04
TUBD1-202ENST00000340993 HIPK3Q9H422 1215 aa14.83□□□□□ -0.04
TUBD1-202ENST00000340993 ZSCAN16Q9H4T2 348 aaPredicted RBP14.83□□□□□ -0.04
TUBD1-202ENST00000340993 CD4P01730 458 aa14.82□□□□□ -0.04
TUBD1-202ENST00000340993 OATP04181 439 aa14.82□□□□□ -0.04
TUBD1-202ENST00000340993 RAG1P15918 1043 aa14.82□□□□□ -0.04
TUBD1-202ENST00000340993 ATP2C1P98194 919 aaPredicted RBP14.82□□□□□ -0.04
TUBD1-202ENST00000340993 DNM1Q05193 864 aaKnown RBP14.82□□□□□ -0.04
TUBD1-202ENST00000340993 POTEGQ6S5H5 508 aa14.82□□□□□ -0.04
TUBD1-202ENST00000340993 ATP8B4Q8TF62 1192 aa14.82□□□□□ -0.04
TUBD1-202ENST00000340993 DHX38Q92620 1227 aaKnown RBP14.82□□□□□ -0.04
TUBD1-202ENST00000340993 BADQ92934 168 aa14.82□□□□□ -0.04
TUBD1-202ENST00000340993 ZNF668Q96K58 619 aaPredicted RBP14.82□□□□□ -0.04
TUBD1-202ENST00000340993 MAFBQ9Y5Q3 323 aaPredicted RBP14.82□□□□□ -0.04
TUBD1-202ENST00000340993 NR2E3Q9Y5X4 410 aa14.82□□□□□ -0.04
TUBD1-202ENST00000340993 LTBP2Q14767 1821 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 MED24O75448 989 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 THPOP40225 353 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 QARSP47897 775 aaKnown RBP14.81□□□□□ -0.04
TUBD1-202ENST00000340993 NPEPPSP55786 919 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 STK38Q15208 465 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 EPHA7Q15375 998 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 C1orf53Q5VUE5 145 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 METTL13Q8N6R0 699 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
TUBD1-202ENST00000340993 AFAP1L1Q8TED9 768 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 SNX29Q8TEQ0 813 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 PIGOQ8TEQ8 1089 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 CLIC6Q96NY7 704 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 LRWD1Q9UFC0 647 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 TUBE1Q9UJT0 475 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 ARID2Q68CP9 1835 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 TET1Q8NFU7 2136 aa14.81□□□□□ -0.04
TUBD1-202ENST00000340993 BRD1O95696 1058 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 CCT6AP40227 531 aaKnown RBP14.8□□□□□ -0.04
TUBD1-202ENST00000340993 PSMC5P62195 406 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 ECM1Q16610 540 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 LRRC71Q8N4P6 559 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 TOX2Q96NM4 488 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 SUGCTQ9HAC7 445 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 TBX21Q9UL17 535 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 GINS2Q9Y248 185 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 ZBTB42B2RXF5 422 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 HBP1O60381 514 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 SLITRK3O94933 977 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 P4HBP07237 508 aaKnown RBP14.8□□□□□ -0.04
TUBD1-202ENST00000340993 KLRC1P26715 233 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 CLCN3P51790 818 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 ORC2Q13416 577 aaPredicted RBP14.8□□□□□ -0.04
TUBD1-202ENST00000340993 MARCH8Q5T0T0 291 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 DEFB128Q7Z7B8 93 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 DNAJB3Q8WWF6 145 aa14.8□□□□□ -0.04
TUBD1-202ENST00000340993 NOC4LQ9BVI4 516 aaKnown RBP14.8□□□□□ -0.04
TUBD1-202ENST00000340993 NRCAMQ92823 1304 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 ACRP10323 421 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 MAGEA10P43363 369 aaPredicted RBP14.79□□□□□ -0.04
TUBD1-202ENST00000340993 FXR2P51116 673 aaKnown RBP eCLIP14.79□□□□□ -0.04
TUBD1-202ENST00000340993 PTPAQ15257 358 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 ANO5Q75V66 913 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 MAEAQ7L5Y9 396 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 CATSPER3Q86XQ3 398 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 RDM1Q8NG50 284 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 RASSF8Q8NHQ8 419 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 ERMNQ8TAM6 284 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 BBXQ8WY36 941 aaPredicted RBP14.79□□□□□ -0.04
TUBD1-202ENST00000340993 CCDC43Q96MW1 224 aaKnown RBP14.79□□□□□ -0.04
TUBD1-202ENST00000340993 ZNF396Q96N95 335 aaPredicted RBP14.79□□□□□ -0.04
TUBD1-202ENST00000340993 GDPD2Q9HCC8 539 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 CEP131Q9UPN4 1083 aa14.79□□□□□ -0.04
TUBD1-202ENST00000340993 GNAT1P11488 350 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 CSF2RAP15509 400 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 YWHABP31946 246 aaKnown RBP14.78□□□□□ -0.04
TUBD1-202ENST00000340993 PTPN11Q06124 597 aaPredicted RBP14.78□□□□□ -0.04
TUBD1-202ENST00000340993 XKR9Q5GH70 373 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms