RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 KRT40Q6A162 431 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 SWSAP1Q6NVH7 229 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 MIS18BP1Q6P0N0 1132 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 B3GNT9Q6UX72 402 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 RPAINQ86UA6 219 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 SMAP1Q8IYB5 467 aaPredicted RBP17.27■□□□□ 0.36
PRKN-201ENST00000338468 TRAPPC12Q8WVT3 735 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 RIT2Q99578 217 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 LLPHQ9BRT6 129 aaKnown RBP17.27■□□□□ 0.36
PRKN-201ENST00000338468 UNC45AQ9H3U1 944 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 ZNF302Q9NR11 478 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
PRKN-201ENST00000338468 TUBE1Q9UJT0 475 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 TRPC6Q9Y210 931 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 MAFBQ9Y5Q3 323 aaPredicted RBP17.27■□□□□ 0.36
PRKN-201ENST00000338468 POTEB3A0JP26 581 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 ZBTB42B2RXF5 422 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 BTBD18B2RXH4 712 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 BACH1O14867 736 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 CAND2O75155 1236 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 CTSHP09668 335 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 SLC26A2P50443 739 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 ADGRE1Q14246 886 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 FAM26DQ5JW98 314 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 LRCH2Q5VUJ6 765 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 FAM160B1Q5W0V3 765 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 PPP4R3AQ6IN85 833 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 PDXDC2PQ6P474 469 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 POTEBQ6S5H4 581 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 NEK8Q86SG6 692 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 ATP8B4Q8TF62 1192 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 TSPYL2Q9H2G4 693 aaPredicted RBP17.26■□□□□ 0.35
PRKN-201ENST00000338468 SLC28A3Q9HAS3 691 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 KCNMB3Q9NPA1 279 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 DDX25Q9UHL0 483 aaKnown RBP17.26■□□□□ 0.35
PRKN-201ENST00000338468 PCDHA10Q9Y5I2 948 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 SLC4A7Q9Y6M7 1214 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 SIP14410 1827 aa17.26■□□□□ 0.35
PRKN-201ENST00000338468 PTPRSQ13332 1948 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 IGSF9BQ9UPX0 1349 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 GBF1Q92538 1859 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 RRN3P2A6NIE6 340 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 ZBBXA8MT70 800 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 GAS7O60861 476 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 CHRNA1P02708 482 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 MGAT3Q09327 533 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
PRKN-201ENST00000338468 TAF2Q6P1X5 1199 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 CNKSR3Q6P9H4 555 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 DIS3L2Q8IYB7 885 aaKnown RBP17.25■□□□□ 0.35
PRKN-201ENST00000338468 NKX2-4Q9H2Z4 354 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
PRKN-201ENST00000338468 GABBR1Q9UBS5 961 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 RAPGEFL1Q9UHV5 662 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
PRKN-201ENST00000338468 WDR81Q562E7 1941 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 MYO9BQ13459 2157 aa17.25■□□□□ 0.35
PRKN-201ENST00000338468 CHD7Q9P2D1 2997 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 WDR64B1ANS9 1081 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 WNT7AO00755 349 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 CHMP2AO43633 222 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 ZNF862O60290 1169 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 BAIAP3O94812 1187 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 PSAPP07602 524 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 ACTN1P12814 892 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 PLA2G5P39877 138 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 RABGGTBP53611 331 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 UGCGQ16739 394 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 DNAJB3Q8WWF6 145 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 HAS1Q92839 578 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 TEKT3Q9BXF9 490 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 DISC1Q9NRI5 854 aa17.24■□□□□ 0.35
PRKN-201ENST00000338468 HBP1O60381 514 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 CCNT1O60563 726 aaKnown RBP17.23■□□□□ 0.35
PRKN-201ENST00000338468 GCFC2P16383 781 aaKnown RBP17.23■□□□□ 0.35
PRKN-201ENST00000338468 ATP2A2P16615 1042 aaKnown RBP17.23■□□□□ 0.35
PRKN-201ENST00000338468 WDR5P61964 334 aaKnown RBP17.23■□□□□ 0.35
PRKN-201ENST00000338468 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 MTHFD1LQ6UB35 978 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 DBF4BQ8NFT6 615 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 BACH2Q9BYV9 841 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 BRMS1Q9HCU9 246 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 VAV3Q9UKW4 847 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 PCDHA2Q9Y5H9 948 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
PRKN-201ENST00000338468 MYH9P35579 1960 aaKnown RBP17.22■□□□□ 0.35
PRKN-201ENST00000338468 MYOGP15173 224 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 SFNP31947 248 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 JAK3P52333 1124 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 DEFB103AP81534 67 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 TRIM29Q14134 588 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 PHOSPHO2Q8TCD6 241 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 BBXQ8WY36 941 aaPredicted RBP17.22■□□□□ 0.35
PRKN-201ENST00000338468 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
PRKN-201ENST00000338468 FAM122AQ96E09 287 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms