RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SPDYE2Q495Y8 402 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 NSMFQ6X4W1 530 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 ERMNQ8TAM6 284 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 FAM151AQ8WW52 585 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 ZKSCAN4Q969J2 545 aaPredicted RBP9.74□□□□□ -0.85
SNCA-201ENST00000336904 EIF3CQ99613 913 aaKnown RBP9.74□□□□□ -0.85
SNCA-201ENST00000336904 GPRC5CQ9NQ84 441 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 CYP3A7-CYP3A51PA0A087WV96 503 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 ZSCAN5CA6NGD5 496 aaPredicted RBP9.74□□□□□ -0.85
SNCA-201ENST00000336904 CETN3O15182 167 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 ITGB5P18084 799 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 CYP3A7P24462 503 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 CAP2P40123 477 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 OTOP1Q7RTM1 612 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 TRIM59Q8IWR1 403 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 SYT2Q8N9I0 419 aaPredicted RBP9.74□□□□□ -0.85
SNCA-201ENST00000336904 TRERF1Q96PN7 1200 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 KIFC3Q9BVG8 833 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 VCPKMTQ9H867 229 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 ESYT3A0FGR9 886 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 NR3C1P04150 777 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 KLRC1P26715 233 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 ORC2Q13416 577 aaPredicted RBP9.73□□□□□ -0.85
SNCA-201ENST00000336904 MTMR2Q13614 643 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 TERF2Q15554 542 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 KNOP1Q1ED39 458 aaKnown RBP9.73□□□□□ -0.85
SNCA-201ENST00000336904 SFMBT2Q5VUG0 894 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 GMLQ99445 158 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 LXNQ9BS40 222 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 SH2D4AQ9H788 454 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 ARMCX3Q9UH62 379 aaPredicted RBP9.73□□□□□ -0.85
SNCA-201ENST00000336904 PRDM4Q9UKN5 801 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 ATRNL1Q5VV63 1379 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 LRRIQ3A6PVS8 624 aaPredicted RBP9.73□□□□□ -0.85
SNCA-201ENST00000336904 FLOT1O75955 427 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 VIL1P09327 827 aaKnown RBP9.73□□□□□ -0.85
SNCA-201ENST00000336904 KLHL30Q0D2K2 578 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 PSMD2Q13200 908 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 Q4G0T1 1027 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 HYIQ5T013 277 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 PLA2G4FQ68DD2 849 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 CCDC102AQ96A19 550 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 SPAG5Q96R06 1193 aa9.73□□□□□ -0.85
SNCA-201ENST00000336904 IPO5O00410 1097 aaKnown RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 USO1O60763 962 aaKnown RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 FGFR1OPO95684 399 aaKnown RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 PTK2Q05397 1052 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 CEP55Q53EZ4 464 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 ODR4Q5SWX8 454 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 BEND6Q5SZJ8 279 aaPredicted RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 RBM46Q8TBY0 533 aaKnown RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 MBOAT7Q96N66 472 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 MYOZ2Q9NPC6 264 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 SEPT11Q9NVA2 429 aaKnown RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 GCNT4Q9P109 453 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 HERC5Q9UII4 1024 aaKnown RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 DNAH12Q6ZR08 3092 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 ZNF646O15015 1829 aaPredicted RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 TESPA1A2RU30 521 aaPredicted RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 GOLGA8IPA6NC78 632 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 GOLGA8JA6NMD2 632 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 TGFB1I1O43294 461 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 PALMO75781 387 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 GFPT2O94808 682 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 WHAMMP3Q1A5X7 153 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 KIAA0753Q2KHM9 967 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 NBPF12Q5TAG4 269 aaPredicted RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 RETREG2Q8NC44 543 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 LRRC27Q9C0I9 530 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 RIPK3Q9Y572 518 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 ATP9AO75110 1047 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 PSMD10O75832 226 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 XRCC5P13010 732 aaKnown RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 NPEPPSP55786 919 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 DLG4P78352 724 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 SPP2Q13103 211 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 UGCGQ16739 394 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 TAAR1Q96RJ0 339 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 HSD17B14Q9BPX1 270 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 LRRC1Q9BTT6 524 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 RABEP2Q9H5N1 569 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 ACP6Q9NPH0 428 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 FAM53CQ9NYF3 392 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 VPS18Q9P253 973 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 DMGDHQ9UI17 866 aaKnown RBP9.72□□□□□ -0.85
SNCA-201ENST00000336904 ZNRF3Q9ULT6 936 aa9.72□□□□□ -0.85
SNCA-201ENST00000336904 CEP350Q5VT06 3117 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 ZMYM2Q9UBW7 1377 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 A0A1W2PQJ5 194 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 CALCAP01258 141 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 NOP2P46087 812 aaKnown RBP9.71□□□□□ -0.85
SNCA-201ENST00000336904 LLGL1Q15334 1064 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 TRADDQ15628 312 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 ASIC2Q16515 512 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 SLC9C1Q4G0N8 1177 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 BTNL9Q6UXG8 535 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 ZNF571Q7Z3V5 609 aaPredicted RBP9.71□□□□□ -0.85
SNCA-201ENST00000336904 FAM178BQ8IXR5 827 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 CCDC170Q8IYT3 715 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms