RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 RAB21Q9UL25 225 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 CSADQ9Y600 493 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 COL16A1Q07092 1604 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 ZSCAN5CA6NGD5 496 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 NDUFB10O96000 172 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 FOSP01100 380 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 MYCP01106 439 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 H2AFZP0C0S5 128 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 ECE1P42892 770 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 IFNAR2P48551 515 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 EPHB4P54760 987 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 GFPT1Q06210 699 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 DPYDQ12882 1025 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 MAN2A1Q16706 1144 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 ZNF772Q68DY9 489 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 H2AFVQ71UI9 128 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 COL23A1Q86Y22 540 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 SULF1Q8IWU6 871 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 SP8Q8IXZ3 490 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 CCDC105Q8IYK2 499 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 VGLL2Q8N8G2 317 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 ZNF579Q8NAF0 562 aaKnown RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 SPATA4Q8NEY3 305 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 OR2W6PQ8NHA6 318 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 PRMT6Q96LA8 375 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 TRIM9Q9C026 710 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 STIM2Q9P246 746 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-201ENST00000336216 TRPC6Q9Y210 931 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 IVNS1ABPQ9Y6Y0 642 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 ABCB11O95342 1321 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 FAM205AQ6ZU69 1335 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 CNTNAP5Q8WYK1 1306 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 RFX7Q2KHR2 1363 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 TUBGCP6Q96RT7 1819 aa7.05□□□□□ -1.28
HMG20A-201ENST00000336216 A0A1W2PRG0 241 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 LAD1O00515 517 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 KRIT1O00522 736 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SYF2O95926 243 aaKnown RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 TRIM49P0CI25 452 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 TRIM49CP0CI26 452 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SSTR3P32745 418 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 UAP1Q16222 522 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 DCUN1D2Q6PH85 259 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SAMD7Q7Z3H4 446 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ARFGAP2Q8N6H7 521 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 DEPTORQ8TB45 409 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 MGARPQ8TDB4 240 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ZNF512BQ96KM6 892 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 WRNIP1Q96S55 665 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 TSGA10Q9BZW7 698 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 GCNT4Q9P109 453 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ASIC3Q9UHC3 531 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 PTPN22Q9Y2R2 807 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SLIT2O94813 1529 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 WDR19Q8NEZ3 1342 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 LRRC53A6NM62 1247 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 PDE2AO00408 941 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 TMOD1P28289 359 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 LIG4P49917 911 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 KIF11P52732 1056 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 POLGP54098 1239 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SEC23AQ15436 765 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ZNF746Q6NUN9 644 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 RPAINQ86UA6 219 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 DNAAF5Q86Y56 855 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ZFPM1Q8IX07 1006 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 RNF169Q8NCN4 708 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ACER1Q8TDN7 264 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 DYDC2Q96IM9 177 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 RMDN3Q96TC7 470 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 PLVAPQ9BX97 442 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 AP1M1Q9BXS5 423 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 IL17RBQ9NRM6 502 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 PCDHA13Q9Y5I0 950 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 EIF3HO15372 352 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SRGAP2CP0DJJ0 459 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 BCRP11274 1271 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 TCP1P17987 556 aaKnown RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 NMT1P30419 496 aaKnown RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 CARSP49589 748 aaKnown RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ZNF543Q08ER8 600 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 RASA3Q14644 834 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 PKN1Q16512 942 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 VWA3BQ502W6 1294 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 MED15Q96RN5 788 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 GOLPH3Q9H4A6 298 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 LRRC4BQ9NT99 713 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 FZD1Q9UP38 647 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 STK38LQ9Y2H1 464 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 MYMKA6NI61 221 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 LGALS16A8MUM7 142 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SLC37A4O43826 429 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ADRA2BP18089 450 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 GCLMP48507 274 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 ZBED6P86452 979 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 CALCOCO2Q13137 446 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 DALRD3Q5D0E6 543 aaKnown RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 RC3H1Q5TC82 1133 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms