RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RNF146Q9NTX7 359 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
LIMK1-201ENST00000336180 SMARCAL1Q9NZC9 954 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 ARHGAP20Q9P2F6 1191 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 PIK3CDO00329 1044 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 PTPRAP18433 802 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 KCNJ6P48051 423 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 UBXN4Q92575 508 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 MXRA8Q9BRK3 442 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 KCND1Q9NSA2 647 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 PHLPP2Q6ZVD8 1323 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
LIMK1-201ENST00000336180 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 ARHGEF16Q5VV41 709 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 FKBP1CQ5VVH2 108 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 NEK11Q8NG66 645 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 CCDC42Q96M95 316 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 NAP1L4Q99733 375 aaKnown RBP13.87□□□□□ -0.19
LIMK1-201ENST00000336180 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.87□□□□□ -0.19
LIMK1-201ENST00000336180 TEKT3Q9BXF9 490 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 L2HGDHQ9H9P8 463 aa13.87□□□□□ -0.19
LIMK1-201ENST00000336180 FZD9O00144 591 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 ZNF185O15231 689 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 BUB1O43683 1085 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 RHOXF2BP0C7M4 288 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 MTMR1Q13613 665 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 TKFCQ3LXA3 575 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 RNF207Q6ZRF8 634 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 FAM133AQ8N9E0 248 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 RHOXF2Q9BQY4 288 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 SLC38A10Q9HBR0 1119 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 PPP1R9AQ9ULJ8 1098 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 ARHGEF35A5YM69 484 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 WDR46O15213 610 aaKnown RBP13.86□□□□□ -0.19
LIMK1-201ENST00000336180 AKR1B10O60218 316 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 CTNND1O60716 968 aaKnown RBP13.86□□□□□ -0.19
LIMK1-201ENST00000336180 KCNA4P22459 653 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 KCNH2Q12809 1159 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 SLC5A5Q92911 643 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 JAKMIP2Q96AA8 810 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 DNAJC7Q99615 494 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 FHDC1Q9C0D6 1143 aaPredicted RBP13.86□□□□□ -0.19
LIMK1-201ENST00000336180 LRRC27Q9C0I9 530 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 ST7Q9NRC1 585 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 TCEAL9Q9UHQ7 104 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 A0A1W2PQC6 194 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 VWA5AO00534 786 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 HIP1RO75146 1068 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 EYA4O95677 639 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 CYP3A4P08684 503 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 CXCR5P32302 372 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 NAP1L1P55209 391 aaKnown RBP13.86□□□□□ -0.19
LIMK1-201ENST00000336180 ZBED6P86452 979 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 KIAA1683Q9H0B3 1180 aa13.86□□□□□ -0.19
LIMK1-201ENST00000336180 AJAP1Q9UKB5 411 aaPredicted RBP13.86□□□□□ -0.19
LIMK1-201ENST00000336180 CETN3O15182 167 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 ATP1A1P05023 1023 aaKnown RBP13.85□□□□□ -0.19
LIMK1-201ENST00000336180 BACE1P56817 501 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 KNOP1Q1ED39 458 aaKnown RBP13.85□□□□□ -0.19
LIMK1-201ENST00000336180 ZNF280CQ8ND82 737 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 CCDC43Q96MW1 224 aaKnown RBP13.85□□□□□ -0.19
LIMK1-201ENST00000336180 NAA15Q9BXJ9 866 aaKnown RBP13.85□□□□□ -0.19
LIMK1-201ENST00000336180 EHD2Q9NZN4 543 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 CEP350Q5VT06 3117 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 GOLGA8IPA6NC78 632 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 GOLGA8JA6NMD2 632 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 TBX3O15119 743 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 NCK2O43639 380 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 ZBED4O75132 1171 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 MOCS3O95396 460 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 PSMD2Q13200 908 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 MOXD1Q6UVY6 613 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 SGIP1Q9BQI5 828 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 DNAH12Q6ZR08 3092 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 ASTN1O14525 1302 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 NR3C1P04150 777 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 MKRN3Q13064 507 aaKnown RBP13.85□□□□□ -0.19
LIMK1-201ENST00000336180 TRIM14Q14142 442 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 TREML2Q5T2D2 321 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 C1orf186Q6ZWK4 172 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 FAM178BQ8IXR5 827 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 SCYL3Q8IZE3 742 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 ZNF397Q8NF99 534 aaPredicted RBP13.85□□□□□ -0.19
LIMK1-201ENST00000336180 CCDC51Q96ER9 411 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 CLMNQ96JQ2 1002 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 GOLPH3Q9H4A6 298 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 MRFAP1Q9Y605 127 aa13.85□□□□□ -0.19
LIMK1-201ENST00000336180 NOL4O94818 638 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 CNTN2Q02246 1040 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 TTLL12Q14166 644 aaPredicted RBP13.84□□□□□ -0.19
LIMK1-201ENST00000336180 TMEM132BQ14DG7 1078 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 PGM5Q15124 567 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 PADI6Q6TGC4 694 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 SYCP3Q8IZU3 236 aa13.84□□□□□ -0.19
LIMK1-201ENST00000336180 ERGIC2Q96RQ1 377 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms