RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 MAGOHP61326 146 aaKnown RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 PPM1KQ8N3J5 372 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 EPS8L2Q9H6S3 715 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 NOD1Q9Y239 953 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 KIF24Q5T7B8 1368 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 MED7O43513 233 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ADAMTS2O95450 1211 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ADAM9Q13443 819 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 TP53BP2Q13625 1128 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ADCK5Q3MIX3 580 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 AASDHQ4L235 1098 aaPredicted RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 TPH2Q8IWU9 490 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 CATSPER2Q96P56 530 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 SNX25Q9H3E2 840 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 SENP1Q9P0U3 644 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 TJP3O95049 919 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 SERPING1P05155 500 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 SOX6P35712 828 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 LIG4P49917 911 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 NLRP9Q7RTR0 991 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ARHGEF25Q86VW2 580 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ABHD8Q96I13 439 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ATP8B3O60423 1300 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 DISP3Q9P2K9 1392 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 KDM5DQ9BY66 1539 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 IMPDH2P12268 514 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 NUP62P37198 522 aaPredicted RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 NME9Q86XW9 330 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 CYGBQ8WWM9 190 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 RSPH1Q8WYR4 309 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 RIMS2Q9UQ26 1411 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 XPAP23025 273 aaPredicted RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ATP2B4P23634 1241 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ADCY1Q08828 1119 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 TMEM154Q6P9G4 183 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 UBN1Q9NPG3 1134 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 FIS1Q9Y3D6 152 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 PCDHB4Q9Y5E5 795 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 AFPP02771 609 aaKnown RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 GRK2P25098 689 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 PSMA3P25788 255 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 USHBP1Q8N6Y0 703 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 E7ENQ6 273 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 GPAA1O43292 621 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 MAST3O60307 1309 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 MTRF1O75570 445 aaKnown RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 FGGP02679 453 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 PMS2P54278 862 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 PSMC6P62333 389 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 DDI1Q8WTU0 396 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 EML4Q9HC35 981 aaKnown RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 POLR3EQ9NVU0 708 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 NDUFA13Q9P0J0 144 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 RWDD2AQ9UIY3 292 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 ABCC1P33527 1531 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 WDR64B1ANS9 1081 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 CPA1P15085 419 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 C16orf89Q6UX73 402 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 KRT26Q7Z3Y9 468 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 GPHNQ9NQX3 736 aaPredicted RBP6.6□□□□□ -1.35
CSMD1-201ENST00000335551 PCDHA13Q9Y5I0 950 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 EMILIN1Q9Y6C2 1016 aa6.6□□□□□ -1.35
CSMD1-201ENST00000335551 FAM83GA6ND36 823 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ARL4AP40617 200 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 PARD3BQ8TEW8 1205 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 APPBP2Q92624 585 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 SOX13Q9UN79 622 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ARHGAP31Q2M1Z3 1444 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 FMNL1O95466 1100 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 GAP43P17677 238 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 UBE3AQ05086 875 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 MAN2A1Q16706 1144 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 DNAJC24Q6P3W2 148 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 RTL3Q8N8U3 475 aaKnown RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 NHEJ1Q9H9Q4 299 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 SERTAD1Q9UHV2 236 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 TNRQ92752 1358 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 PAPOLAP51003 745 aaKnown RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 HSPA2P54652 639 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 GPIHBP1Q8IV16 184 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ARHGEF1Q92888 912 aaKnown RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 NLRP3Q96P20 1036 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 DSCC1Q9BVC3 393 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 DONSONQ9NYP3 566 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 SEL1LQ9UBV2 794 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ARMCX4Q5H9R4 360 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 TBC1D9BQ66K14 1250 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 CC2D2BQ6DHV5 1058 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 B4GALNT2Q8NHY0 566 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 EME1Q96AY2 570 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 NT5C1BQ96P26 610 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 PCDHA7Q9UN72 937 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 MYH1P12882 1939 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 MYH2Q9UKX2 1941 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 MYH4Q9Y623 1939 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 TCF3P15923 654 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms