RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 UVRAGQ9P2Y5 699 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 A0A1W2PP64 1363 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 POC1B-GALNT4F8VUJ3 575 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 K7ENM7 598 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 ARL4AP40617 200 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 MDH1P40925 334 aaKnown RBP5.91□□□□□ -1.46
PTPRB-202ENST00000334414 TXKP42681 527 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 SKOR1P84550 965 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 TCP11X2Q5H9J9 407 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 NME9Q86XW9 330 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 PLD3Q8IV08 490 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 ATP11CQ8NB49 1132 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 DNAJC9Q8WXX5 260 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 KCNK16Q96T55 309 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 MAGEB5Q9BZ81 275 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 GCNT4Q9P109 453 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 STK36Q9NRP7 1315 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 E2F6O75461 281 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 PAPOLAP51003 745 aaKnown RBP5.91□□□□□ -1.46
PTPRB-202ENST00000334414 COPS2P61201 443 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 EFL1Q7Z2Z2 1120 aaKnown RBP5.91□□□□□ -1.46
PTPRB-202ENST00000334414 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.91□□□□□ -1.46
PTPRB-202ENST00000334414 SAC3D1A6NKF1 404 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 FOSP01100 380 aaPredicted RBP5.91□□□□□ -1.46
PTPRB-202ENST00000334414 NR5A1Q13285 461 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 ARL13BQ3SXY8 428 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 SPOPLQ6IQ16 392 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 LMBR1LQ6UX01 489 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 TRIM67Q6ZTA4 783 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 CCDC80Q76M96 950 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 RFX6Q8HWS3 928 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 PYROXD1Q8WU10 500 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 RBM17Q96I25 401 aaKnown RBP5.91□□□□□ -1.46
PTPRB-202ENST00000334414 NLRP3Q96P20 1036 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 DDX25Q9UHL0 483 aaKnown RBP5.91□□□□□ -1.46
PTPRB-202ENST00000334414 ADAM30Q9UKF2 790 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 NFU1Q9UMS0 254 aa5.91□□□□□ -1.46
PTPRB-202ENST00000334414 PA2G4Q9UQ80 394 aaKnown RBP5.91□□□□□ -1.46
PTPRB-202ENST00000334414 AARSP49588 968 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 LIG4P49917 911 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 YARSP54577 528 aaKnown RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 EFTUD2Q15029 972 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 NDUFA5Q16718 116 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 AFAP1Q8N556 730 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 TEKT3Q9BXF9 490 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 NRDE2Q9H7Z3 1164 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 PPME1Q9Y570 386 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 TLK2Q86UE8 772 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 CCDC85AQ96PX6 553 aaPredicted RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 SLC24A3Q9HC58 644 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 NSMCE4AQ9NXX6 385 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 STAP2Q9UGK3 403 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 TNPO2O14787 897 aaKnown RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 CAPN9O14815 690 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 IL1RL1Q01638 556 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 PPARAQ07869 468 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 PCNX4Q63HM2 1172 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 TRMT44Q8IYL2 757 aaKnown RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 SNRKQ9NRH2 765 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 ETAA1Q9NY74 926 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 PCDHA4Q9UN74 947 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 ABCC10Q5T3U5 1492 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 WDR17Q8IZU2 1322 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 RALBP11234 206 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 DDIT3P35638 169 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 ARFIP2P53365 341 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 FKBP3Q00688 224 aaKnown RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 OCRLQ01968 901 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 TP53BP2Q13625 1128 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 TRIM16LQ309B1 348 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 KBTBD12Q3ZCT8 623 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 SIX6OS1Q8N1H7 587 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 GDAP1Q8TB36 358 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 NACA2Q9H009 215 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 ZBTB3Q9H5J0 574 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 OLFML3Q9NRN5 406 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 ZNF711Q9Y462 761 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 USP15Q9Y4E8 981 aaPredicted RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 SAMD9Q5K651 1589 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 LOC102724159A0A0B4J2E5 919 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 A0A0G2JND7 137 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 PWP2Q15269 919 aaKnown RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 FAM26FQ5R3K3 315 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 WLSQ5T9L3 541 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 RASSF3Q86WH2 238 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 WNT8AQ9H1J5 351 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 LZTS3O60299 673 aaPredicted RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 GAS7O60861 476 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 MARK3P27448 753 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 USP14P54578 494 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 TCEANC2Q96MN5 208 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 CATSPER2Q96P56 530 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 BEGAINQ9BUH8 593 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 KRCC1Q9NPI7 259 aaPredicted RBP5.9□□□□□ -1.46
PTPRB-202ENST00000334414 MTMR6Q9Y217 621 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 GMEB1Q9Y692 573 aa5.9□□□□□ -1.46
PTPRB-202ENST00000334414 CDC42BPBQ9Y5S2 1711 aa5.9□□□□□ -1.47
PTPRB-202ENST00000334414 GFPT2O94808 682 aa5.9□□□□□ -1.47
PTPRB-202ENST00000334414 KIF19Q2TAC6 998 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms