RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 UBE2SQ16763 222 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 ERFEQ4G0M1 354 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 CCDC38Q502W7 563 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 GJB7Q6PEY0 223 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 ELAC2Q9BQ52 826 aaKnown RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 E9PMD0 336 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 SHBGP04278 402 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 COASYQ13057 564 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 FAM26FQ5R3K3 315 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 ZNF571Q7Z3V5 609 aaPredicted RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 KSR1Q8IVT5 923 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 SH3RF3Q8TEJ3 882 aaPredicted RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 MIEF2Q96C03 454 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 NLRP3Q96P20 1036 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 ACTR5Q9H9F9 607 aaPredicted RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 SH3GLB2Q9NR46 395 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 ARPP21Q9UBL0 812 aaPredicted RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 NR2E1Q9Y466 385 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 TNS2Q63HR2 1409 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 H0YGN5 161 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 LAD1O00515 517 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 IL6STP40189 918 aaPredicted RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 PRPHP41219 470 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 GNAQP50148 359 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 LRRC63Q05C16 580 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 ADAM9Q13443 819 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 PAF1Q8N7H5 531 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 U2AF1L4Q8WU68 220 aaKnown RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 STAMBPL1Q96FJ0 436 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 MLXIPLQ9NP71 852 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 NFS1Q9Y697 457 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 FGGP02679 453 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 PPP1R2P41236 205 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 PLTPP55058 493 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 BYSLQ13895 437 aaKnown RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 ALKBH5Q6P6C2 394 aaKnown RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 TXNRD3Q86VQ6 643 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 RAD54LQ92698 747 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 GLG1Q92896 1179 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 MAGEF1Q9HAY2 307 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 MYH3P11055 1940 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 ATXN2Q99700 1313 aaKnown RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 SPDYE3A6NKU9 549 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 ERVV-1B6SEH8 477 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 MMEP08473 750 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 KRT13P13646 458 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 CHN1P15882 459 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 GNA11P29992 359 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 PEX19P40855 299 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 KCNH2Q12809 1159 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 IQCDQ96DY2 449 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 GPR101Q96P66 508 aaPredicted RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 ATP8A2Q9NTI2 1148 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 CICQ96RK0 1608 aaPredicted RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 FGRP09769 529 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 CHRM1P11229 460 aaPredicted RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 MAPK1P28482 360 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 CUL1Q13616 776 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 CLEC10AQ8IUN9 316 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 MTFR1LQ9H019 292 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 NOD2Q9HC29 1040 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 SNX24Q9Y343 169 aa8.59□□□□□ -1.03
VMA21-201ENST00000330374 UTP11Q9Y3A2 253 aaKnown RBP8.59□□□□□ -1.03
VMA21-201ENST00000330374 HIBADHP31937 336 aaKnown RBP8.58□□□□□ -1.04
VMA21-201ENST00000330374 LRRC14Q15048 493 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 UBAP2Q5T6F2 1119 aaKnown RBP8.58□□□□□ -1.04
VMA21-201ENST00000330374 CCDC25Q86WR0 208 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 DGKHQ86XP1 1220 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 CCDC63Q8NA47 563 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 CCDC197Q8NCU1 140 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 TATDN2Q93075 761 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 BTG4Q9NY30 223 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 KIAA1024Q9UPX6 916 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 STK38LQ9Y2H1 464 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 TMEM110-MUSTN1A8MSY1 372 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 TRIM37O94972 964 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 PCP11498 1178 aaKnown RBP8.58□□□□□ -1.04
VMA21-201ENST00000330374 OTUD6AQ7L8S5 288 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 TMC3Q7Z5M5 1100 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 CHMP6Q96FZ7 201 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 XPO6Q96QU8 1125 aaKnown RBP8.58□□□□□ -1.04
VMA21-201ENST00000330374 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.04
VMA21-201ENST00000330374 AZI2Q9H6S1 392 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 BMP2KQ9NSY1 1161 aaPredicted RBP8.58□□□□□ -1.04
VMA21-201ENST00000330374 BCS1LQ9Y276 419 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 COL18A1P39060 1754 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 USP17L5A8MUK1 530 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 DRD4P21917 467 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 NR2F2P24468 414 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 USP11P51784 963 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 IFI35P80217 286 aaPredicted RBP8.58□□□□□ -1.04
VMA21-201ENST00000330374 ADCY1Q08828 1119 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 BIRC3Q13489 604 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 LRIG3Q6UXM1 1119 aa8.58□□□□□ -1.04
VMA21-201ENST00000330374 LRRC34Q8IZ02 419 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms