RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 UBE3CQ15386 1083 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 RGS9BPQ6ZS82 235 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 GRAPLQ8TC17 118 aaPredicted RBP15.18■□□□□ 0.02
FNDC1-202ENST00000329629 TTC17Q96AE7 1141 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 UPF3AQ9H1J1 476 aaKnown RBP15.18■□□□□ 0.02
FNDC1-202ENST00000329629 CUEDC2Q9H467 287 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 IQANK1A0A1B0GTG1 560 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 FAM160B1Q5W0V3 765 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 SPATA31E1Q6ZUB1 1445 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.18■□□□□ 0.02
FNDC1-202ENST00000329629 PITPNM3Q9BZ71 974 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 KMT5AQ9NQR1 393 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 CREB3O43889 395 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 XPAP23025 273 aaPredicted RBP15.18■□□□□ 0.02
FNDC1-202ENST00000329629 ARL4AP40617 200 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 BBS5Q8N3I7 341 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 PYROXD1Q8WU10 500 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 ALKBH8Q96BT7 664 aaKnown RBP15.18■□□□□ 0.02
FNDC1-202ENST00000329629 HSPA8P11142 646 aaKnown RBP15.18■□□□□ 0.02
FNDC1-202ENST00000329629 ADCY2Q08462 1091 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 CCHCR1Q8TD31 782 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 HSPA4LO95757 839 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 SOX5P35711 763 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 HSPH1Q92598 858 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 TRPV6Q9H1D0 765 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 ZWILCHQ9H900 591 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 POLR3EQ9NVU0 708 aa15.18■□□□□ 0.02
FNDC1-202ENST00000329629 LAD1O00515 517 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 GYG2O15488 501 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 MAGEA9P43362 315 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 EIF3BP55884 814 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 BEND6Q5SZJ8 279 aaPredicted RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 CRLF3Q8IUI8 442 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 NCLNQ969V3 563 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 GPR108Q9NPR9 543 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 USP17L3A6NCW0 530 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 USP17L4A6NCW7 530 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 DCTN3O75935 186 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 LMNAP02545 664 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 PTPREP23469 700 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 RSRC2Q7L4I2 434 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 USP17L1Q7RTZ2 530 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 ZBTB33Q86T24 672 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 NSUN7Q8NE18 718 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 RPS6KC1Q96S38 1066 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 SNX25Q9H3E2 840 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 PPARGC1AQ9UBK2 798 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 AKT3Q9Y243 479 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 PCP11498 1178 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 NOP14P78316 857 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 OR6B2Q6IFH4 312 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 RNF207Q6ZRF8 634 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 GSPT2Q8IYD1 628 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 SPATA17Q96L03 361 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 RNF14Q9UBS8 474 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 WARS2Q9UGM6 360 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 GAP43P17677 238 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 CD58P19256 250 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 CDC25AP30304 524 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 GLE1Q53GS7 698 aaKnown RBP15.17■□□□□ 0.02
FNDC1-202ENST00000329629 KCTD1Q719H9 257 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 FAM167BQ9BTA0 163 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 FGFR1OP2Q9NVK5 253 aa15.17■□□□□ 0.02
FNDC1-202ENST00000329629 hCG_2014768A0A024R1R8 64 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 SRGAP2O75044 1071 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 CD2BP2O95400 341 aaKnown RBP15.16■□□□□ 0.02
FNDC1-202ENST00000329629 OCA2Q04671 838 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 TFDP1Q14186 410 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 TADA2BQ86TJ2 420 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 GIPC2Q8TF65 315 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 RNF123Q5XPI4 1314 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 A2ML1A8K2U0 1454 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 TET3O43151 1660 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 MYO1CO00159 1063 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 THAP9Q9H5L6 903 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 MRPL47Q9HD33 250 aaKnown RBP15.16■□□□□ 0.02
FNDC1-202ENST00000329629 PI4K2BG5E9Z4 385 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 IREB2P48200 963 aaKnown RBP15.16■□□□□ 0.02
FNDC1-202ENST00000329629 TOGARAM2Q6ZUX3 1019 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 CENPUQ71F23 418 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 C7orf31Q8N865 590 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 ENOX1Q8TC92 643 aaKnown RBP15.16■□□□□ 0.02
FNDC1-202ENST00000329629 NXF1Q9UBU9 619 aaKnown RBP15.16■□□□□ 0.02
FNDC1-202ENST00000329629 SLFN14P0C7P3 912 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 TMPRSS15P98073 1019 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 MMS22LQ6ZRQ5 1243 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 FAM47EQ6ZV65 393 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 SPICE1Q8N0Z3 855 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 SAYSD1Q9NPB0 183 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 C21orf2O43822 256 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 PRPSAP2O60256 369 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 MAN1A2O60476 641 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 SCARA5Q6ZMJ2 495 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 ZFP69BQ9UJL9 534 aa15.16■□□□□ 0.02
FNDC1-202ENST00000329629 CCDC195A0A1B0GUA6 201 aa15.15■□□□□ 0.02
FNDC1-202ENST00000329629 ACTN3Q08043 901 aaPredicted RBP15.15■□□□□ 0.02
FNDC1-202ENST00000329629 TLR7Q9NYK1 1049 aaKnown RBP15.15■□□□□ 0.02
FNDC1-202ENST00000329629 SYCE1LA8MT33 242 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms