RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 DNERQ8NFT8 737 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 RRAGCQ9HB90 399 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 NKRFO15226 690 aaKnown RBP eCLIP22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 TBCAO75347 108 aaKnown RBP22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 ZSCAN20P17040 1043 aaPredicted RBP22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 KRT76Q01546 638 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 UBXN1Q04323 297 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 Q3C1V9 767 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 IWS1Q96ST2 819 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 TSG101Q99816 390 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 COL4A3BPQ9Y5P4 624 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 PFASO15067 1338 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 LGALS16A8MUM7 142 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 STAM2O75886 525 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 KCNA2P16389 499 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 OSBPP22059 807 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 SNAPC2Q13487 334 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 ZNF507Q8TCN5 953 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 KCTD10Q9H3F6 313 aa22.42■■□□□ 1.18
RIPPLY3-201ENST00000329553 CCP110O43303 1012 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 ERCC3P19447 782 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 JAK3P52333 1124 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 RBL2Q08999 1139 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 LRRC55Q6ZSA7 311 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 OGFRQ9NZT2 677 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 ITIH6Q6UXX5 1313 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 ARHGEF35A5YM69 484 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 WDR64B1ANS9 1081 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 KIF20AO95235 890 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 SFNP31947 248 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 MTIF2P46199 727 aaKnown RBP22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 UGCGQ16739 394 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 EPM2AIP1Q7L775 607 aaPredicted RBP22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 CPLX3Q8WVH0 158 aa22.41■■□□□ 1.18
RIPPLY3-201ENST00000329553 SPATA31C2B4DYI2 1134 aa22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 PES1O00541 588 aaKnown RBP22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 FAM13AO94988 1023 aa22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 LYPLA2O95372 231 aa22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 FGFR1OPO95684 399 aaKnown RBP22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 MYBP10242 640 aa22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 STXBP2Q15833 593 aa22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 SYT10Q6XYQ8 523 aa22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 MRPL44Q9H9J2 332 aaKnown RBP22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 PRDM10Q9NQV6 1147 aa22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 KCND2Q9NZV8 630 aa22.4■■□□□ 1.18
RIPPLY3-201ENST00000329553 UNCXA6NJT0 531 aa22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 B4DLN1 442 aa22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 GAP43P17677 238 aa22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 ALDH5A1P51649 535 aaPredicted RBP22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 FKBP3Q00688 224 aaKnown RBP22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 ZNF746Q6NUN9 644 aaPredicted RBP22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 PPFIBP1Q86W92 1011 aa22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 ZNF397Q8NF99 534 aaPredicted RBP22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 CDHR1Q96JP9 859 aa22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 SENP7Q9BQF6 1050 aa22.39■■□□□ 1.18
RIPPLY3-201ENST00000329553 SOWAHBA6NEL2 793 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 AKR1B15C9JRZ8 316 aaPredicted RBP22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 POTEB2H3BUK9 544 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 SLC25A27O95847 323 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 HOXD13P35453 343 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 GNPTABQ3T906 1256 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 MIIPQ5JXC2 388 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 TMEM139Q8IV31 216 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 C4orf19Q8IY42 314 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 MYCT1Q8N699 235 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 NOC4LQ9BVI4 516 aaKnown RBP22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 OLFML3Q9NRN5 406 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 TCEAL9Q9UHQ7 104 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 DDX41Q9UJV9 622 aaKnown RBP22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 DBR1Q9UK59 544 aaKnown RBP22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 PRDM4Q9UKN5 801 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 TELO2Q9Y4R8 837 aa22.39■■□□□ 1.17
RIPPLY3-201ENST00000329553 EIF3JO75822 258 aaKnown RBP22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 PRPF6O94906 941 aaKnown RBP22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 GUCY2CP25092 1073 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 PSMC5P62195 406 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 PADI6Q6TGC4 694 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 PARVGQ9HBI0 331 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 PCDHA10Q9Y5I2 948 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 LOXHD1Q8IVV2 1947 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 GYPCP04921 128 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 YWHABP31946 246 aaKnown RBP22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 RARRES1P49788 294 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 DNM2P50570 870 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 ZNF131P52739 623 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 ETF1P62495 437 aaKnown RBP22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 DMTNQ08495 405 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 FAM133AQ8N9E0 248 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 RDM1Q8NG50 284 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 ODF2LQ9ULJ1 636 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 NFASCO94856 1347 aa22.38■■□□□ 1.17
RIPPLY3-201ENST00000329553 TMEM150BA6NC51 233 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 SP2Q02086 613 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 KNOP1Q1ED39 458 aaKnown RBP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 UTP14CQ5TAP6 766 aaKnown RBP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 DOCK5Q9H7D0 1870 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 A0A1W2PQC6 194 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 GCNT3O95395 438 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 NMT1P30419 496 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms