RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 DDX47Q9H0S4 455 aaKnown RBP20.7■□□□□ 0.9
SPSB1-201ENST00000328089 RRP15Q9Y3B9 282 aaKnown RBP20.7■□□□□ 0.9
SPSB1-201ENST00000328089 BMP3P12645 472 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 PSMD2Q13200 908 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 PDCLQ13371 301 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 KNOP1Q1ED39 458 aaKnown RBP20.69■□□□□ 0.9
SPSB1-201ENST00000328089 SYDE2Q5VT97 1194 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 EIF2AK1Q9BQI3 630 aaKnown RBP20.69■□□□□ 0.9
SPSB1-201ENST00000328089 CWC15Q9P013 229 aaKnown RBP20.69■□□□□ 0.9
SPSB1-201ENST00000328089 KDM3AQ9Y4C1 1321 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 BACH1O14867 736 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 HOXD13P35453 343 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 KIAA1755Q5JYT7 1200 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 RBM26Q5T8P6 1007 aaKnown RBP20.69■□□□□ 0.9
SPSB1-201ENST00000328089 ALKBH5Q6P6C2 394 aaKnown RBP20.69■□□□□ 0.9
SPSB1-201ENST00000328089 ERMNQ8TAM6 284 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 RBM46Q8TBY0 533 aaKnown RBP20.69■□□□□ 0.9
SPSB1-201ENST00000328089 AHDC1Q5TGY3 1603 aaPredicted RBP20.69■□□□□ 0.9
SPSB1-201ENST00000328089 NR3C1P04150 777 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 SMARCA1P28370 1054 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 HSPA1LP34931 641 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 SLC18A3Q16572 532 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 MED4Q9NPJ6 270 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 ATF5Q9Y2D1 282 aaPredicted RBP20.69■□□□□ 0.9
SPSB1-201ENST00000328089 PCDHA2Q9Y5H9 948 aa20.69■□□□□ 0.9
SPSB1-201ENST00000328089 COL22A1Q8NFW1 1626 aaPredicted RBP20.68■□□□□ 0.9
SPSB1-201ENST00000328089 ADRA2BP18089 450 aa20.68■□□□□ 0.9
SPSB1-201ENST00000328089 GLYCTKQ8IVS8 523 aa20.68■□□□□ 0.9
SPSB1-201ENST00000328089 FAM84AQ96KN4 292 aa20.68■□□□□ 0.9
SPSB1-201ENST00000328089 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
SPSB1-201ENST00000328089 MCM3P25205 808 aa20.68■□□□□ 0.9
SPSB1-201ENST00000328089 SP4Q02446 784 aa20.68■□□□□ 0.9
SPSB1-201ENST00000328089 SYCP3Q8IZU3 236 aa20.68■□□□□ 0.9
SPSB1-201ENST00000328089 KCNMB3Q9NPA1 279 aa20.68■□□□□ 0.9
SPSB1-201ENST00000328089 SMCHD1A6NHR9 2005 aa20.68■□□□□ 0.9
SPSB1-201ENST00000328089 GRID2IPA4D2P6 1211 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 C21orf2O43822 256 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 AFPP02771 609 aaKnown RBP20.67■□□□□ 0.9
SPSB1-201ENST00000328089 GCFC2P16383 781 aaKnown RBP20.67■□□□□ 0.9
SPSB1-201ENST00000328089 PON1P27169 355 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 GNGT1P63211 74 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 RPS6KA1Q15418 735 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 ASTE1Q2TB18 679 aaPredicted RBP20.67■□□□□ 0.9
SPSB1-201ENST00000328089 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 DAAM2Q86T65 1068 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 DPH5Q9H2P9 285 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.67■□□□□ 0.9
SPSB1-201ENST00000328089 OSGEPQ9NPF4 335 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 hCG_1984214I3L0E3 225 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 HSF2BPO75031 334 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 LRCH2Q5VUJ6 765 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 ZNF713Q8N859 430 aaPredicted RBP20.67■□□□□ 0.9
SPSB1-201ENST00000328089 PRR12Q9ULL5 1215 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 BTAF1O14981 1849 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 ITGA4P13612 1032 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 NPR1P16066 1061 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 HNRNPH3P31942 346 aaKnown RBP20.67■□□□□ 0.9
SPSB1-201ENST00000328089 ZNF211Q13398 564 aaPredicted RBP20.67■□□□□ 0.9
SPSB1-201ENST00000328089 DHX37Q8IY37 1157 aaKnown RBP20.67■□□□□ 0.9
SPSB1-201ENST00000328089 ACP6Q9NPH0 428 aa20.67■□□□□ 0.9
SPSB1-201ENST00000328089 RAD51CO43502 376 aa20.66■□□□□ 0.9
SPSB1-201ENST00000328089 TUBB4BP68371 445 aa20.66■□□□□ 0.9
SPSB1-201ENST00000328089 ZNF746Q6NUN9 644 aaPredicted RBP20.66■□□□□ 0.9
SPSB1-201ENST00000328089 ETNPPLQ8TBG4 499 aa20.66■□□□□ 0.9
SPSB1-201ENST00000328089 RPGRIP1Q96KN7 1286 aa20.66■□□□□ 0.9
SPSB1-201ENST00000328089 ZIM3Q96PE6 472 aa20.66■□□□□ 0.9
SPSB1-201ENST00000328089 CELF4Q9BZC1 486 aaKnown RBP20.66■□□□□ 0.9
SPSB1-201ENST00000328089 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
SPSB1-201ENST00000328089 SLFN12Q8IYM2 578 aa20.66■□□□□ 0.9
SPSB1-201ENST00000328089 HOOK2Q96ED9 719 aa20.66■□□□□ 0.9
SPSB1-201ENST00000328089 CCDC17Q96LX7 622 aa20.66■□□□□ 0.9
SPSB1-201ENST00000328089 EPB41P11171 864 aaKnown RBP20.65■□□□□ 0.9
SPSB1-201ENST00000328089 CDK17Q00537 523 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 ODR4Q5SWX8 454 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 UHMK1Q8TAS1 419 aaKnown RBP20.65■□□□□ 0.9
SPSB1-201ENST00000328089 BCAS4Q8TDM0 211 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 LUC7LQ9NQ29 371 aaKnown RBP20.65■□□□□ 0.9
SPSB1-201ENST00000328089 LAMB1P07942 1786 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 SMIM23A6NLE4 172 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 ALDH1B1P30837 517 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 CFAP58Q5T655 872 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 AENQ8WTP8 325 aaKnown RBP20.65■□□□□ 0.9
SPSB1-201ENST00000328089 LENG9Q96B70 501 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 AMACRQ9UHK6 382 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 MYH1P12882 1939 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 NAV1Q8NEY1 1877 aa20.65■□□□□ 0.9
SPSB1-201ENST00000328089 PPIP5K2O43314 1243 aa20.64■□□□□ 0.9
SPSB1-201ENST00000328089 GAS7O60861 476 aa20.64■□□□□ 0.9
SPSB1-201ENST00000328089 NAB2Q15742 525 aa20.64■□□□□ 0.9
SPSB1-201ENST00000328089 ABCB11O95342 1321 aa20.64■□□□□ 0.9
SPSB1-201ENST00000328089 NRAPQ86VF7 1730 aa20.64■□□□□ 0.9
SPSB1-201ENST00000328089 TARSL2A2RTX5 802 aaKnown RBP20.64■□□□□ 0.89
SPSB1-201ENST00000328089 OPLAHO14841 1288 aa20.64■□□□□ 0.89
SPSB1-201ENST00000328089 TUBBP07437 444 aa20.64■□□□□ 0.89
SPSB1-201ENST00000328089 ARP10275 920 aa20.64■□□□□ 0.89
SPSB1-201ENST00000328089 USP11P51784 963 aa20.64■□□□□ 0.89
SPSB1-201ENST00000328089 SPIRE1Q08AE8 756 aa20.64■□□□□ 0.89
SPSB1-201ENST00000328089 HHIPL2Q6UWX4 724 aa20.64■□□□□ 0.89
SPSB1-201ENST00000328089 PEX26Q7Z412 305 aa20.64■□□□□ 0.89
SPSB1-201ENST00000328089 PHLDB2Q86SQ0 1253 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms