RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SLFN11Q7Z7L1 901 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 RNF25Q96BH1 459 aaPredicted RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 PNMA5Q96PV4 448 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 TSG101Q99816 390 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 TRIM31Q9BZY9 425 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 KIAA1551Q9HCM1 1747 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 STXBP3O00186 592 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 SNUPNO95149 360 aaKnown RBP13.91□□□□□ -0.18
CCDC60-201ENST00000327554 ZNF131P52739 623 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 ANKRD20A2Q5SQ80 823 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 ANKRD20A1Q5TYW2 823 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 ANKRD20A3Q5VUR7 823 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 GALNT17Q6IS24 598 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 ZNF571Q7Z3V5 609 aaPredicted RBP13.91□□□□□ -0.18
CCDC60-201ENST00000327554 CABLES1Q8TDN4 633 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 CALML4Q96GE6 196 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 YIPF3Q9GZM5 350 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 PABPC3Q9H361 631 aaKnown RBP13.91□□□□□ -0.18
CCDC60-201ENST00000327554 AZI2Q9H6S1 392 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 GGT7Q9UJ14 662 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 SLIT2O94813 1529 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 COL1A1P02452 1464 aaPredicted RBP13.91□□□□□ -0.18
CCDC60-201ENST00000327554 CCNT1O60563 726 aaKnown RBP13.91□□□□□ -0.18
CCDC60-201ENST00000327554 RWDD2BP57060 319 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 BNIP1Q12981 228 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 LETM2Q2VYF4 491 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 IRF2BP2Q7Z5L9 587 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 ZMYND12Q9H0C1 365 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 ARHGEF3Q9NR81 526 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 ADAM22Q9P0K1 906 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 SUCLA2Q9P2R7 463 aaPredicted RBP13.91□□□□□ -0.18
CCDC60-201ENST00000327554 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
CCDC60-201ENST00000327554 AP1G2O75843 785 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 PMS2P54278 862 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 FKBP3Q00688 224 aaKnown RBP13.9□□□□□ -0.18
CCDC60-201ENST00000327554 THEMIS2Q5TEJ8 643 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 PEX26Q7Z412 305 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 HEATR3Q7Z4Q2 680 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 TRIM59Q8IWR1 403 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 KIF2BQ8N4N8 673 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 NEK9Q8TD19 979 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 ZNF384Q8TF68 577 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 NSRP1Q9H0G5 558 aaKnown RBP13.9□□□□□ -0.18
CCDC60-201ENST00000327554 KANSL2Q9H9L4 492 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 BARHL2Q9NY43 387 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 STK17AQ9UEE5 414 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 TLDC2A0PJX2 215 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 CCDC169A6NNP5 214 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 PDE6BP35913 854 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 IFNAR2P48551 515 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 COPS2P61201 443 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 KLRC3Q07444 240 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 DUPD1Q68J44 220 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 LARP4BQ92615 738 aaKnown RBP13.9□□□□□ -0.18
CCDC60-201ENST00000327554 KLHL29Q96CT2 875 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 MOV10L1Q9BXT6 1211 aaKnown RBP13.9□□□□□ -0.18
CCDC60-201ENST00000327554 NAGPAQ9UK23 515 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 NENFQ9UMX5 172 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
CCDC60-201ENST00000327554 TRAF5O00463 557 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 RGS16O15492 202 aaPredicted RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 CYTH3O43739 400 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 AGTP01019 485 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 FESP07332 822 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 PECAM1P16284 738 aaPredicted RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 ATP2A2P16615 1042 aaKnown RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 UBAP2Q5T6F2 1119 aaKnown RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 ASRGL1Q7L266 308 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 NT5DC3Q86UY8 548 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 COL23A1Q86Y22 540 aaPredicted RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 HES6Q96HZ4 224 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 FAM167BQ9BTA0 163 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 RAB17Q9H0T7 212 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 ZFATQ9P243 1243 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 USP15Q9Y4E8 981 aaPredicted RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 EVI5O60447 810 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 LUC7L3O95232 432 aaKnown RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 MSH2P43246 934 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 PDE6CP51160 858 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 PTENP60484 403 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 SEPT2Q15019 361 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 RBBP5Q15291 538 aaKnown RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 CNGA2Q16280 664 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 TNFAIP8L3Q5GJ75 292 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 DENND2CQ68D51 928 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 MYOCDQ8IZQ8 938 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
CCDC60-201ENST00000327554 TTC7AQ9ULT0 858 aaPredicted RBP13.89□□□□□ -0.19
CCDC60-201ENST00000327554 SPDYE3A6NKU9 549 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 SMIM23A6NLE4 172 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 AHCYL1O43865 530 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 CYP2D6P10635 497 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 RAB27AP51159 221 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 MARSP56192 900 aaKnown RBP13.88□□□□□ -0.19
CCDC60-201ENST00000327554 PSMD2Q13200 908 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 PLS1Q14651 629 aa13.88□□□□□ -0.19
CCDC60-201ENST00000327554 GRM4Q14833 912 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms